Burkholderia latens: WK25_13490
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Entry
WK25_13490 CDS
T04819
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
blat
Burkholderia latens
Pathway
blat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WK25_13490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blat03400
]
WK25_13490
Enzymes [BR:
blat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
WK25_13490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
WK25_13490
DNA repair and recombination proteins [BR:
blat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WK25_13490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AOK05392
UniProt:
A0AAP1C7S1
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All DBs
Position
1:complement(2908704..2909531)
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AA seq
275 aa
AA seq
DB search
MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSSAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASE
SLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGLPCRVCGTPIRQIVQGQRSTYFCPTCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagtcgaagtcacgcgcaggggcatcgcgccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgcaccgcaatgctgcgctggccggtgccggccgga
ctcgccgagcaattgcgcgcacgcgaggtgctcgccgtcgagcgtcgcggcaagtacctg
ctgttcgaggtcgacgccggctggttcatcgtccatctcgggatgacgggcacgctgcgc
gtgctgcccgcggccggcgtgccggttgccgcgaaacacgatcacatcgactggatcttc
gacgaattcgtgctgcggttccgcgatccgcgccgtttcggcgcggtgctgtggcacccg
cgcgaagcgggcgacgtgcacgcgcatccgctgctcgcaagcctcggcgtcgagccgttc
tcgtccgcgttcaccggtgcgctcctgcatgcacgcacgcgcggccgcacggtatcggtc
aagcaggcgctcctcgccggcgacatggttgtcggcgtcggcaatatctatgcatcggag
agcctgtttcgcgccggcatccggccgacgaccgccgccggcaaggtttcgctgccgcgc
tacgagcggctcgccgacgcagtgcgcgcgacgctcgccgatgcgatcgagcgcggcggc
agcacgttgcgcgatttcgtcggcagcaacggcgaaagcggctatttccagctcgactgc
ttcgtctatgaccgcgccggactgccttgccgcgtgtgcggcacgccgatccgtcagatc
gtgcagggtcagcgttcgacctatttctgcccgacctgccagcgttga
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