Burkholderia latens: WK25_18565
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Entry
WK25_18565 CDS
T04819
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
blat
Burkholderia latens
Pathway
blat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WK25_18565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blat03021
]
WK25_18565
Transcription machinery [BR:
blat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WK25_18565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_ner
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AOK06496
LinkDB
All DBs
Position
3:complement(670867..672738)
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AA seq
623 aa
AA seq
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MPVRSAPASAAGSGGGGTLPHAAAHLQALIATGLSRGFVTRGDIIDALPDDDAHHSGVDA
AAAVLGELGIAVRDRTDTASGWTLERYFRPAPAARAWVDGAGALAAAELLAPRTTDPVRL
YLREMGMTPLLTRDEEFAYARRLERGRAASVAVLCGDPEALDALVAIRTEIAECRSPASI
YVVCLADGAGDDARSVDAAAHAAPAIAGESIRADEGDDMSPRHDDSVQRNAIVARLAGLD
ALARSMRAALATGGTASAAYRANVRDAAALLGTLHLSARALERMSEALRARARRQRMLRG
RLARMLAEVGVASSFAHAADADHAGWLASCIAAHPACGPILTRRAADFVDARDTIVRDAR
TSALPPDATATLDARLGAIERAMHAARNGLFDANLRLVVSIAKRYPDRGLPFADLIQEGN
IGLLKAIERYDYRRGFRFSTYATWWIRQAITHALADFGRTIRVPTHTADALNKLARIARE
HRQRAGTAPTPAQLAAHMGEPVDKVRDLMAIVKEPVSADVPISPEGDMTFADVAPDLSSP
SPEEAAGAAQLRRTIAAAIDRLPSREATVLRLRYGLQTDEGCSLRDIGRQLNLSAERVRQ
IEAAALARLRASDALGALRSFIA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcggtccgcaccggcatccgcggcaggcagtggcggtggcggcacactgccg
cacgccgccgcgcatctgcaagcgctgatcgcgacgggcctgtcgcgcggtttcgtcacg
cgcggcgacatcatcgacgcactgcccgacgacgacgcgcaccacagcggcgtcgacgcg
gcggccgcggtgctcggcgagctcggcatcgccgtgcgcgaccgtaccgataccgcgagc
ggctggacgctcgagcgctacttccgcccggcgccggccgcgcgcgcatgggtcgacggg
gccggtgcactcgccgcggcggaattgctcgcgccgcgcacgactgatccggtccggctg
tacctgcgcgaaatgggcatgacgccgcttctcacacgcgacgaggaattcgcctatgcc
cggcggctcgaacgcgggcgcgcggcatcggtcgcggtactgtgcggcgatcccgaagca
ctcgacgcgctggttgccatccgcacggaaatcgccgaatgccggagcccggcatcgatc
tacgtggtctgtctcgccgatggcgcgggcgacgatgcacgatccgtcgacgccgcggca
cacgctgcgccggccatcgcaggtgaatccatccgcgccgacgaaggcgacgacatgagc
ccacgccacgacgattccgtgcagcgcaacgcgatcgtggcacggctcgccggtctcgac
gcgctggcccgcagcatgcgcgcggcgctcgcgaccggcggcacggcgtcggccgcctat
cgggcaaatgtccgcgacgctgcggcgttgctcggcacactgcatctgtccgctcgagcg
ctcgagcgcatgagcgaagcattgcgcgcccgcgcacgccgacagcgcatgctgcgcggc
cggctggcgcgcatgctggccgaggtgggcgttgcgtcgtcgttcgcgcatgcggccgac
gcggaccacgcgggctggctcgcgtcgtgcatcgccgcgcatccggcctgcgggccgatc
ctcacacggcgcgctgcggacttcgtcgatgcgcgtgacacgatcgtgcgcgatgcccgg
acatcggcgcttccgcccgacgcgaccgcaacgctcgatgcgcgccttggcgcgatcgaa
cgcgcgatgcacgccgcccgcaacgggctgttcgatgcgaatttgcggctcgtcgtgtcg
attgcgaagcgctatcccgatcgcgggctgccgttcgcggacctgatccaggaaggcaac
atcggcctgctgaaggcaatcgagcgctacgactatcggcgcggcttccggttctccacc
tacgcaacctggtggatccggcaggcgatcacgcatgcgctcgccgatttcggccgcacg
atccgcgtgcccacgcatacggccgacgcgctgaacaagctcgcgcgaatcgcgcgcgaa
caccggcaacgcgcgggcacggcgcccacgcccgcgcaactggccgctcacatgggcgaa
ccggtcgacaaggtgcgcgacctgatggcgatcgtcaaggaaccggtatcggccgacgtg
ccgatctcgccggaaggcgacatgacgttcgcggacgtcgcgccggacttgtcgtcgccg
tcgccggaggaggccgccggcgccgcgcaactgcgcagaacgatcgccgccgcgatcgac
cggctgccatcgcgcgaagcgacggtcctccggctgcgctatgggctgcaaacggacgag
ggctgctcgctgcgcgacatcggacgccagctgaacctgtccgccgaacgcgtgcggcag
atcgaagcggcggcacttgcgcgcctgcgcgcatccgacgcgctgggcgcgctccggtca
ttcatcgcgtag
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