Burkholderia latens: WK25_24275
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Entry
WK25_24275 CDS
T04819
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
blat
Burkholderia latens
Pathway
blat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
WK25_24275
09124 Replication and repair
03420 Nucleotide excision repair
WK25_24275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blat03021
]
WK25_24275
03036 Chromosome and associated proteins [BR:
blat03036
]
WK25_24275
03400 DNA repair and recombination proteins [BR:
blat03400
]
WK25_24275
Enzymes [BR:
blat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
WK25_24275
Transcription machinery [BR:
blat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
WK25_24275
Chromosome and associated proteins [BR:
blat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
WK25_24275
DNA repair and recombination proteins [BR:
blat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
WK25_24275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
GlgS
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOK08628
LinkDB
All DBs
Position
2:1104561..1106861
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSKRGARYETEIALTGTWGT
LTVRGRADGYDPVANRVEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCAARGLAEIDV
ALVYFDIVSERETVLTETLSASALAEFFAEQCACFVGWAERETAHRAARDAALRALTFPH
GQFRSGQRELAVSVYRAARDERCLMAQAPTGIGKTLGTVFPLLKACGEGELDRVFFLTAK
TPGRALALDAAATLGAGTPALPLRVLELVARDKACEHPDRACHGESCPLAQGFYDRLPAA
RDAAIGAGLLDRGTVRPAALAHDVCPYYLAQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAARDAAPAALRKAFDRLARAWGALNRA
QAERYAAYPDIPGPIVSAVQHLVATIGEHLADAPRANDDALLRFHFDAIQFGMLADAFDS
ASIFDATLHGEPLPRQPALDGVVPAGRRRRIQSTLCVRNVIPAGFLAPRYEAARATVLFS
GTLSPFHFYRDTLGLPADTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLARVVALMQVRHPHVPVWAQAPGMGESERDAFLARFDARGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcatcgccggacatggcgcagtc
acgtcgaaacgcggcgcgcgctacgaaaccgaaatcgcgctgaccggcacctggggcacg
ctcacggtgcgcgggcgcgcggatggctacgacccggtcgcgaaccgtgtcgaggaaatc
aagacctaccgcggcagcctcgatgcgatgccggccaaccatcgcgcgctgcactgggcg
caggcgaaggtctatgcgcacctcatgtgcgccgcccgcggtctcgcggaaatcgacgtc
gcgctcgtgtatttcgacatcgtgtccgaacgcgagaccgtgctgacggaaacgctgagc
gcaagcgcgcttgccgagtttttcgccgagcagtgcgcgtgcttcgtcggctgggccgag
cgcgagaccgcgcaccgagcggcgcgcgatgcggcgctgcgtgcgctgacgtttccgcac
ggacagttccgcagcgggcagcgcgaactggccgtgtccgtctatcgggccgcgcgcgac
gaacgctgcctgatggcgcaggcgccgaccggcatcggcaagaccctcggcacggtgttc
ccgttgctgaaggcgtgcggcgagggcgagctcgatcgcgtgttctttttgaccgcgaag
acgcccggccgcgcgctcgcactcgacgcggcggcgacgctcggcgcgggcacgccggcg
ctgccgctgcgcgtgctcgaactcgtcgcgcgcgacaaggcgtgcgagcatccggaccgc
gcgtgtcacggcgagtcttgcccgctcgcgcaaggcttctacgaccggctgccggccgcg
cgcgatgcggcgatcggtgcagggctgctcgatcgcggcaccgtgcgcccggcggcgctc
gcgcacgacgtctgcccgtattacctcgcgcaggaactcgcccggtggtcggacatggtg
atcggcgactacaactattactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaagcgcacaacctgctcgatcgcgcgcgc
aagatgtacagcgcgtcgctcgacccgttcgcgttcgcggccgcgcgggacgcggcgccc
gcggcgctgcgcaaggcgttcgaccggctcgcacgggcgtggggggcgctcaatcgcgcg
caggccgagcgttacgccgcgtatcctgacatccccgggccgatcgtctcggcggttcag
cacctcgtcgcgacgattggcgaacatctcgccgacgccccgcgcgcgaacgacgatgcg
ctgctgcgcttccatttcgatgcgatccagttcggcatgcttgccgacgcgttcgacagc
gcgtccatcttcgacgcgacgctgcacggcgaaccgctgccgcgccagccggcgctcgac
ggcgtcgtgccggccggccgccggcgacgcatccagtcgacgctgtgcgtgcgcaacgtg
atcccggccgggtttcttgcaccgcgctacgaagcagcgcgcgcgacggtgctgttttcc
ggcacgctgagcccgtttcatttctatcgcgacacgctcgggctgccggccgatacgggc
tggctcgacgtcgacgggccgttccgcgcggagcagctgaccgtgcgcgtcgcgagccat
gtgtcgacccgctggcgcgatcgcgaccgttcgctcgaaccgatcgcggacctgatcgcc
gcgcagtatgcgacgcgacccggcaactacctcggttttctcagcagcttcgactatctg
gcgcgtgtcgtcgcgctgatgcaggtgcgtcatcctcacgtgccggtatgggcgcaggcg
cctggcatgggcgaaagcgagcgcgacgcgtttcttgcgcgtttcgacgcgcgcgggcgc
ggcgtaggcttcgcggtgctgggcggcgcgttttctgaaggggtggatctcgtcggcgag
cggctgatcggcgcattcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgaa
cagatgcggcgcgcgatggatgcgcgtttcggcaacgggtacgactacatgtacctttat
ccggggctgcagaaggtcgtgcaggcggccggacgcgtgatccgcaccgaacacgacgag
ggcgtcgtgcacctgatcgacgatcgctatcgacgacgggaggtgcgcgatctgttgccg
cgatggtggcggatcgggtga
DBGET
integrated database retrieval system
