Burkholderia latens: WK25_29480
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Entry
WK25_29480 CDS
T04819
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
blat
Burkholderia latens
Pathway
blat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WK25_29480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blat03019
]
WK25_29480
Enzymes [BR:
blat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
WK25_29480
Messenger RNA biogenesis [BR:
blat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WK25_29480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
B12-binding
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOK08506
LinkDB
All DBs
Position
2:complement(2304352..2305833)
Genome browser
AA seq
493 aa
AA seq
DB search
MSFASLGLIEPLQRNLRDLNYQTPTPVQAKAIPAVLGGKDVMAAAQTGTGKTAGFALPLL
QRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFVAYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVQALVLDEADRMLDLGFARELNAVFAALPAQR
QTLLFSATFTDDIRAMAASILRKPVDISVSPPNATASKIKQWVVPVDKRNKPDLFMHLVR
ENNWEHALVFVKTRAGVDYLAAMLHDAGYAVDTIHGDKPQPARLRALERFKAGDVQMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRQTLRREEEPGFEAEHRVPETSATGQIIKKPKKPKKPKVPQAQPAPRPMPGKKPHAQ
NGDGKRKPAAQRTTAPGNGAGGASANVISGSPFSVQKPRAKSGGKAAGKPGAGPGKPGGK
PGKPAGGRGKGRP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgcctcgcttggcctgatcgagccgttgcagcgcaatctgcgagatctcaat
taccagacacctacgccggtgcaggccaaggcgattcctgccgtgctcggcggcaaggac
gtgatggctgctgcacagaccggcaccggcaagaccgccggtttcgcgctgccgctgctg
caacggctggtgcaacacgggccggccgtgtccagcaaccgcgcgcgtgttctggtgctg
gtgcccacgcgcgaactggcggagcaggtgctgcaaagcttcgtcgcatacggcaagggc
ctcgatttgcgcttcctggccgcctacggcggcgtgagcatcaatccgcagatgatgaag
ctgcgcaagggtgtcgacgtgctcgtcgccacgccgggccggctgctggatctcaatcgc
cagaacgccgtgcagttcgatcaggtgcaggcgctggtgctcgacgaagccgaccgcatg
ctcgatctcggcttcgcgcgcgagcttaatgccgtctttgccgcgttgccggcgcagcgg
cagacgctgctgttctccgccacgttcaccgacgacatccgcgcgatggcggcaagcatt
ctgcgcaagccggtcgatatcagcgtcagtccgcccaatgcgacggccagcaagatcaag
caatgggtcgtgccggtggacaagcggaacaagccggacctcttcatgcacctggtgcgc
gagaacaactgggagcacgcgctggtgttcgtgaagacgcgtgcgggcgtggactacctc
gcggcgatgttgcacgacgcgggctatgcggtcgacacgatccacggcgacaagccgcag
cccgcgcgattgcgcgcgctggagcgcttcaaggccggcgacgtgcaaatgctggtcgcc
acggacgtggcggcgcgcgggctcgatatcgacgacctgccgctggtgatcaacgtcgat
ctgccgatcgtcgcgcaggactacgtgcatcgcatcggccgcaccggtcgtgcgggcgcg
agcggtgtggccgtgtcgctcgtgtgcgcggacgaagccccgcaactggccgcgatcgaa
gcgctgatccggcagacgctgcgtcgcgaagaggagccgggtttcgaagccgaacatcgg
gtgccggaaaccagtgcgaccgggcagatcatcaagaagccgaaaaagccaaagaaaccg
aaagtgccgcaggcgcagccggcgcccaggccgatgccaggcaaaaagccgcatgcgcaa
aatggtgatgggaagcgcaagccggcggcgcagcggacgacggctccgggcaatggcgcg
ggcggcgcaagcgcgaacgtgatcagcggcagcccgttcagcgtgcaaaagccgcgcgcg
aaatcgggcggcaaagctgcgggcaagccgggtgcggggcctggcaagccgggcgggaag
cctggcaagcccgccggcggccgcggcaaaggccggccctga
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