Bifidobacterium longum subsp. longum BBMN68: BBMN68_117
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Entry
BBMN68_117 CDS
T01345
Symbol
polC
Name
(GenBank) PolC
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
blb
Bifidobacterium longum subsp. longum BBMN68
Pathway
blb03030
DNA replication
blb03430
Mismatch repair
blb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBMN68_117 (polC)
03430 Mismatch repair
BBMN68_117 (polC)
03440 Homologous recombination
BBMN68_117 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blb03032
]
BBMN68_117 (polC)
03400 DNA repair and recombination proteins [BR:
blb03400
]
BBMN68_117 (polC)
Enzymes [BR:
blb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBMN68_117 (polC)
DNA replication proteins [BR:
blb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBMN68_117 (polC)
DNA repair and recombination proteins [BR:
blb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBMN68_117 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
UPF0158
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADQ02132
LinkDB
All DBs
Position
complement(136129..136836)
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AA seq
235 aa
AA seq
DB search
MTTSGITVFGQPSQPNHGAGGRIAMDDAVFPTDYVALDLETTGFYPNSCAITEIGAVRVR
EGHIVDQFQQLVNPLRPIPRQITTLTGITDAMVADLDPIDEVLPRFIAWLATPAAGPAVE
PIVGHNVSFDLRFLDYNTRHIAGCGFACADYDTMQISRALFPAQRHHRLADLIVRFGIAD
NEEHRALSDAIQTQQCFEWMRHYVTEHHESEAIRWKQAPAKNSAEILHQQLVVKR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacttccggcattaccgttttcggccaaccatcccagcccaatcatggtgccggc
gggcgaatcgccatggacgatgccgtcttccccaccgattatgtggcgctggatttggag
accaccggcttttacccgaacagttgcgccatcacggaaatcggtgccgtgcgcgtgcgg
gaggggcatatcgtcgatcaattccagcagctggtgaatcccttgcggccgattccgcgt
cagatcaccacgctgaccggcatcaccgatgcgatggtggccgacctcgatccgattgac
gaggtgcttccccgattcatcgcatggctcgctaccccggctgccggtcccgccgtcgag
ccgattgtcggccataacgtcagcttcgatctgcgattcctggattacaacacccggcat
atcgccggctgcggctttgcctgcgcggattatgacacgatgcagatcagccgcgccctg
ttccccgcgcagcggcatcaccgtctggccgacctgatcgtacgcttcggcatcgcggac
aatgaggagcaccgcgcattaagcgatgccatccaaacccagcagtgcttcgaatggatg
cggcattatgtcaccgagcatcacgaatccgaagcgatccgctggaagcaggcgccggcc
aaaaacagcgccgaaatcctccaccagcagttggtggtaaagcggtag
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