Bifidobacterium longum subsp. longum BBMN68: BBMN68_1770
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Entry
BBMN68_1770 CDS
T01345
Name
(GenBank) Superfamily II DNA/RNA helicase
Organism
blb
Bifidobacterium longum subsp. longum BBMN68
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ERCC3_RAD25_C
SWIM
SWI2_SNF2
DUF4018
Motif
Other DBs
NCBI-ProteinID:
ADQ02824
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Position
2186970..2190830
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AA seq
1286 aa
AA seq
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MSAADAVMPYRFRQGRSVWFDDEDEGHFAGSAKRAEAHAVPILALRNDVESSSSNAVLAR
ARSIARKAATMVINPVYSENHRTGYAELDGILRGTTSPSSRYRTSVQFDLDTGEAVGGKC
SCPAYGRGYGMCKHMIALAFIFCDDPQRFEGYRAGAARPSRTLIDYMEHADRQDAQAKIR
RRNAVMRRFDATQGKNGANARRTKSGYGSRAGTRGGGYQGDSETVGLGQVQLVPILSFID
GVWSVEFKIGSASNGSSYVLKSIPQFVLAMANGDYADYGQKLAFIHTPDMLDDDSRPLLD
VLDDAMAVRRAAEQQDRYYGHIAIDRHLTLSAPEVARLLSVREGRGAQLVLNTWFSGQPA
SVPVDGGEPDFLMRIARRDFNTYGPDAGYLLTGVPAVETVIDGGKNVWLLLASTNPAGAV
SAMVAGSQRKSAAGCRFVRCPKRLIPLRGLLGDLFEPDGEGQVIAGDDIALFARTLLPQL
VGAGLLEASEIPRELAELSPTECSLQFYLDRDEHGVQCEVKARYGDAIVPLLPDGPTVHA
EGERSIPLSRGVIGRDFDAEHLAIDVVREFFTMPDQRKRVAAATHQTVNGFRTPAARKAT
KKFVSDAATIDRDDTTQIVRLFDEGLPALKEVGEVFTTPAFDRLIAPKPPSVKVGLSIKG
NLVEISPLADEVPPDEVGALLSSYRRRQRFHQLKDGTLVKLSGANLSTLDRLASDLDLSE
QQLNSGLIELPGGRAFLLDGELPDDGSDVVKDASFTEYIDDLKIIDPKSYEVPDSLKHIL
RPYQVEGFQWLNTLCDKGFGGILADEMGLGKSVQLIALLLSRYQRNTGEMGNGSLGPSLI
VCPASLVYNWGAEFTKFAPSFNAVVVAGTKAERRTAIGRAFRADEPTVLITSYDLLRRDV
DDYTANEQRFNVMALDEAQYIKNHTTKIAKAVKAVAADHRFALTGTPIENRLSELWSIFD
FLMPGLLGSYKRFHERYELPISNARAADGSTAEGRAAAQVNPEAARVSRQLQSLVGVFIK
RRLKSQVLTDLPDKLETTLTVRLAGEQRKLYAAHEQRLRMQLEHSEEADFNTSKIRILAE
LTKLRQICCDPRLLYADAKDQSAKLAAITELVETCVNEGKKALIFSQFTSFLDLIAERFD
AQGLRYYTITGSTPKKKRLELVDQFNADDTPAFLISLKAGNTGLNLTGASVVIHADPWWN
AAAQDQATDRAHRIGQTEDVNVYQVVAKDTIEERILELQHTKSELARQFTDASLLADEAG
TGASALTEAPASIATLTKDDLLNLLG
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgccgccgatgcggtgatgccctatcgtttcaggcaaggacgttccgtatggttc
gacgatgaggacgaaggccatttcgccgggtctgcgaagcgtgccgaagcccatgccgtc
cctatccttgcgttacgcaacgatgtggaatcgtcatcgtcgaatgccgtgctcgctcgt
gcccgtagcattgcgcgcaaagcggccaccatggttatcaatccggtatacagcgaaaat
catcgaaccgggtatgccgagcttgacggtattctacgtggcaccaccagcccatcgagt
aggtatcgtaccagcgtgcaattcgacctcgatacgggagaagccgtcggtggcaagtgc
tcatgcccggcttacggccgtggctatggcatgtgcaagcacatgattgcgctcgccttc
atattctgcgatgatccgcagcgttttgaaggctaccgtgccggggccgcacgaccgtct
cggacgctgattgactatatggagcacgctgataggcaagacgctcaagccaaaattcgt
cgtcgcaatgcggttatgcgtcggtttgatgccacgcaagggaaaaacggtgcaaatgct
cggcgtacaaaaagcggatacggctctcgtgccggcacccgaggcggcgggtatcagggt
gacagcgagactgtgggcttggggcaggtgcagcttgtcccgatattgagtttcatcgac
ggcgtgtggagcgtggagttcaagatcggctcggcttccaatgggtccagctatgtgctg
aaatcgattccgcaatttgtgcttgccatggcgaacggcgactatgcggattatgggcag
aagcttgcctttattcatacgccggatatgctcgatgatgattcgcgccccctgctggac
gtccttgatgatgcgatggccgtgcgtcgtgcggccgagcagcaggacaggtattacggg
catatcgccatcgaccgtcatctgacgctttcagcaccggaagtggcccggttgctgtcc
gtacgtgagggcagaggcgcacagctcgtgctgaacacatggttctccgggcagcctgca
tcggtgccagttgatggtggcgagccagattttctcatgcgcattgcgcggcgtgatttc
aatacgtatggtccggatgccggatacctgcttaccggagtgccagcggtggaaaccgtg
attgacggcggcaagaatgtatggctgttgctcgcctccactaatccggccggtgcggta
tccgccatggtggcgggctctcagcgtaaaagcgcagcaggatgccgattcgtccgttgc
ccgaaacgattgattccgttgcgaggactattgggagacctgtttgaacccgatggcgag
ggacaggtcattgccggcgatgacatcgccctattcgcacgcacgctattgcctcagctg
gttggtgccggactgttggaggccagtgagattcctcgcgagctggctgaattaagtcct
acggaatgcagcctccagttttatctggatcgtgatgagcatggtgtgcaatgcgaggtc
aaggcacgctacggcgatgccattgtcccgttgctacccgatggcccgacggtgcatgct
gagggcgagcgttccatccccttgtctcggggcgtgattgggcgtgatttcgacgctgag
catcttgcgattgatgtagtgcgtgaattctttaccatgcctgaccagcgcaagcgcgtt
gcggccgccactcatcagacggtgaatgggttccgaacgccggccgcgcgaaaggccacc
aaaaaattcgtgtctgatgcggccactatcgatcgcgatgacaccacgcagatcgttcgt
ctctttgacgagggattgccggcactaaaggaagtgggggaggtcttcaccacaccggct
tttgaccggctgatcgcgcccaagccaccaagcgtcaaagtcggattgtccatcaaaggc
aacttggtggagatatcacccctcgctgatgaagtgccgccggacgaagtgggtgccttg
ctatcttcgtaccgtcggcgtcaacgattccatcagttgaaggacggcacgcttgtcaaa
ctcagcggcgcgaatctcagcacgttggaccgattggccagcgacctcgatctgagcgag
cagcagctcaactccggactgatcgagttgccgggcggtcgagcattcctactggatggt
gagctgccggatgacggctccgatgtagtcaaggacgcttcgttcaccgaatacatcgac
gatctcaagatcatcgaccctaagtcgtatgaagtgccggatagtctcaagcatattctg
cgcccttatcaggtcgaaggctttcaatggctgaacacgttgtgcgacaagggttttggc
ggcattctggccgatgagatgggcttgggtaaatccgtgcagcttatcgcgttgctcctg
tctcgatatcagcggaataccggcgagatgggcaatggcagccttggcccatcgctgatc
gtgtgcccggcgtccttggtgtacaactggggtgccgaattcaccaagttcgccccgagc
ttcaatgccgtggtggtggccggtaccaaagccgagcgccgtaccgccatcggccgtgcg
ttccgggcggatgaacccaccgtgctcatcacctcatacgacctgctgcgccgagatgtc
gatgattacaccgccaatgagcaacgtttcaatgtcatggcattggatgaagcccagtac
atcaagaatcacaccacgaaaatagccaaagcggtcaaggccgtggccgccgaccatcgt
ttcgccttgactggcacgccgatcgaaaaccgactctccgaactatggagcattttcgac
ttcctgatgccggggctgctcggctcatataagcgattccatgagcgttatgagttgccc
atctccaatgcccgggccgcggatggcagcacggctgaaggtcgggccgccgcacaagtc
aatcctgaggccgctcgggtatctcgccaattgcagtcgttggtgggcgtgttcatcaag
cgcaggctgaagtcccaggtgttgaccgatttgccggacaagctagagaccacgctgacc
gtgcggcttgccggcgaacagcgcaaactgtatgcggctcacgagcagcggctcagaatg
cagctcgaacacagcgaagaagccgatttcaacacgtcgaagattcgcatcctcgccgag
ttgaccaagttgcgccagatctgctgcgatccgaggctgctgtacgccgatgccaaggat
caatcggccaagcttgccgccatcaccgaactggtggaaacctgtgtgaacgaaggcaag
aaggcgctgatcttctcccagttcaccagcttccttgatctgatcgccgaacgtttcgac
gcgcaaggcctgcgctactacaccatcaccggctccacgcccaagaagaagcgtctcgaa
ctcgtcgaccagttcaatgcggacgatacgcctgccttcctgatttccctgaaggccggc
aacaccggactgaacctgaccggtgccagcgtggtcatccacgccgacccatggtggaac
gccgccgcacaggatcaggccaccgaccgagcacatcgtatcggccagaccgaagacgtc
aacgtgtatcaggtggtggccaaggacaccatcgaagaacgtatcttggagcttcagcat
actaagagcgagctcgcccgccagttcaccgacgcttccttgcttgccgacgaagccggc
accggcgccagcgccctcaccgaagcccccgcctccatcgccaccctcaccaaggacgat
ctcctcaatctgctggggtga
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