Bifidobacterium longum subsp. longum BBMN68: BBMN68_697
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Entry
BBMN68_697 CDS
T01345
Symbol
rnd
Name
(GenBank) Rnd
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
blb
Bifidobacterium longum subsp. longum BBMN68
Brite
KEGG Orthology (KO) [BR:
blb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blb03016
]
BBMN68_697 (rnd)
Enzymes [BR:
blb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BBMN68_697 (rnd)
Transfer RNA biogenesis [BR:
blb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BBMN68_697 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADQ03432
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All DBs
Position
complement(792353..793579)
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AA seq
408 aa
AA seq
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MDGYHRVCDALAEATGSLAADAERASGFRYGHEDWLIQFKREGAGIALLDPVALTRAGAD
WNEFNDAVGDATWILHDSLMDLPGFAEIGLKPKALFDTEIAARLLGLHRFGLAAVTEHYL
GITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIELETMMRRDLKAAGKDEWAAEEFSHA
LVAGLAPRKPHPIPWLRISRITQLSRDPRGLAIAKSLWEERDRLARQYDIAPSLLLADSS
IIEAATNKPHNAAQFRALRSLNERVRIHTGTEQDKMFERYAPIQRAVKPKVWKQAIDRAM
ALKPTQWPTMPAPEQDENGVVNAPRSMRLWQQRHPERYDRLQRVRRVINRIAEDTRTPAE
MIIKPQILRNLCWVEDPVEVDVETFLIEQGARNWQVKLIAPSVSGVIM
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
ttggacggctatcatcgtgtctgcgatgcgctggccgaggcgacgggctcgctggccgcc
gacgccgaacgggcgtccggcttccgctatggacacgaggattggctgattcagttcaaa
cgtgagggtgcaggcatcgccttgcttgatcccgtcgccctgacccgggccggagctgat
tggaatgaattcaatgacgccgtgggcgacgccacgtggattctgcatgattctctgatg
gacttgcccggattcgccgaaatcgggctcaaacccaaagccctgttcgacacggaaata
gcggcgcgattgctcggcctgcaccgcttcggtctggccgccgtcaccgaacactacctc
ggcatcacgctagccaaagagcactccgccgccgattggtcctaccgtccgctgccgcgc
gactggcgcaactatgctgcgctcgacgtggaggtgcttatcgaacttgaaaccatgatg
cgtcgtgacctgaaagccgcaggcaaggacgagtgggccgctgaagagttttctcacgct
ttggttgcgggccttgccccgcgcaaaccgcatccgattccttggctgcgtatctcgcgc
atcacccagctgagtcgtgatccaaggggcctggccatcgccaaatccctatgggaggag
cgcgaccgactcgcccggcaatacgatattgcgcccagcctgttattggccgattcatca
atcatcgaggcggcgacaaacaagccgcacaatgctgcccaattccgcgcgctccgatcc
ctgaacgagcgtgtgcgcatccataccggcaccgagcaggacaaaatgttcgagcggtac
gcgccgattcagcgtgcggtcaaaccgaaggtctggaagcaggccatcgatcgagccatg
gccctgaagcccacccaatggcctaccatgcccgcccccgaacaggacgaaaacggtgtg
gtgaacgcgccccgatccatgcggctgtggcaacagcgccatccggagcgttatgaccgt
ctgcaacgggtacggcgtgtgatcaaccgcatcgccgaagacacccgcacgccggccgag
atgatcatcaagccacagatcctacgcaatctgtgctgggtggaagacccggtggaagtg
gacgtcgagacgttcctgatcgagcagggcgcaaggaactggcaagtgaaactcattgca
ccgtccgtaagtggcgttatcatgtag
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