Bifidobacterium longum subsp. longum BBMN68: BBMN68_970
Help
Entry
BBMN68_970 CDS
T01345
Symbol
rpoB
Name
(GenBank) RpoB
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
blb
Bifidobacterium longum subsp. longum BBMN68
Pathway
blb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BBMN68_970 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blb03021
]
BBMN68_970 (rpoB)
03400 DNA repair and recombination proteins [BR:
blb03400
]
BBMN68_970 (rpoB)
Enzymes [BR:
blb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BBMN68_970 (rpoB)
Transcription machinery [BR:
blb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BBMN68_970 (rpoB)
DNA repair and recombination proteins [BR:
blb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BBMN68_970 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
IF-2
Motif
Other DBs
NCBI-ProteinID:
ADQ01923
LinkDB
All DBs
Position
complement(1136258..1139821)
Genome browser
AA seq
1187 aa
AA seq
DB search
MATESTTNTTTIIARADQHDIDLHKASDRVNFGSIKEPIDVPYLLGVQTDSFDWLIGNER
WKARVEEDEKNGTNTVAHTSGLDEVFNEISPIENFAQTMSLTFSDPYFEEPRHTVQECKE
KDYTYSAPLYVNAEFENGDTGEIKSQTVFMGDFPLQTPHGTFIIGGTERVIVSQLVRSPG
VYFDRQQDRTSDKEVFGAKIIPSRGAWLEFEIDKKDQPQVRVDRKRKQSAIVFLMAIGMT
KSEIAQAFKDYPLVLDALEKETLETQDEALVDLYRKIRPADTPTPEAGKNLLDSFYFNTK
RYDLARVGRYKINRKLGVEADFNDRSLHQEDIIATIKYLVALHDGAATFPGKRNGEDVDL
RVDVDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVRERMTTQDAEAITPQSLINIRPV
NATIKEFFGTSQLSQFMDQNNPLSGVTNKRRLSALGPGGLSRDRASMEVRDVHPSHFGRM
CPIESPEGPNIGLIGSLATFGRVNPFGFIETPYRKVVNGHVTDEVEYMTADRDLDHVIAQ
ANQELDENGNFVQKSALARVGEEEAVDVPVSSVDYMDVSPRQMVSLGASLIPFLEHDEGH
RALMGTNMQRQAVPLIESERPLVGTGSEWRAANDSGDVIKSEKDGVVTYVSADLIRVMND
DGTTSSYKLAKFQRSNQTTCYNQRPIVHDGERVEAGSVMADGPAIQNGDLALGKNLLIAF
MPWNGYNYEDAVIISQRLVQDDTLSSIHIEEYEIDARETKLGAEEITRDLPNVGEDAVAN
LDERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHGE
TGTVIGVKEITREDAEEDGDELPNGVNQMIRVYIAQHRKITVGDKLSGRHGNKGCISRIL
PEEDMPFLADGTPVDIMLNPLGVPSRMNLGQVLELHLGWIAHSGWDISLDPNLEAEWKKL
IPSGAEKAEPNTPVATPVFDGVKPEVLKGLLSTTLPNRDGDRLVGPDGKATLFDGRTGEP
YTKPISVGYMYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEA
YGAAYTLHEMMTTKSDDVDGRVRVYGAIVKGDNLPPAGIPESFKVLLKEMQSLSLNVEVL
NAEGVAIDMKDEDDDPASSADDLGFNIGARPDAAAKEDQKAEEPEYQ
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
ttggctactgagtctacgacgaacaccaccaccatcatcgcacgcgccgaccagcatgat
attgacctgcacaaggcgtcggatcgcgtgaacttcggttccatcaaggaacccatcgat
gtgccctacctgctgggcgtgcagaccgacagcttcgattggctgatcggcaacgaacgc
tggaaggcgcgcgtcgaggaggacgaaaagaacggcactaacaccgtggcccacacctcc
ggcctcgatgaggtcttcaacgagatctctccgatcgagaacttcgctcagaccatgagc
ctgaccttctccgatccgtacttcgaagagccgcgtcacaccgtgcaggaatgcaaggag
aaggattacacctactccgcaccgctgtacgtgaatgccgagttcgagaacggcgacacc
ggcgagatcaagtcccagaccgtgttcatgggcgatttcccgctgcagaccccgcacggt
accttcatcatcggcggcaccgagcgagtcatcgtctcccagctcgtgcgttccccgggc
gtctacttcgaccgccagcaggatcgcacctccgataaggaagtcttcggcgcgaagatc
atcccgagccgtggtgcatggctcgagttcgagatcgataagaaagaccagccgcaggtg
cgcgtggaccgcaagcgcaagcagtccgccatcgtgttcctcatggccatcggcatgacc
aagtccgagatcgcccaggcattcaaggactacccgctggtgctcgacgcactggagaag
gaaaccctcgagacccaggacgaggccctcgttgacctctaccgcaagattcgtccggcc
gacaccccgacccccgaggccggcaagaatctgctggactccttctacttcaacaccaag
cgctacgatctggcccgtgttggccgctacaagatcaaccgcaagctgggtgtcgaggcc
gatttcaacgatcgttccctccaccaggaagacatcatcgccacaatcaagtacctggtg
gccctgcacgacggtgcggcgaccttcccgggcaagcgcaacggcgaagacgttgacctg
cgcgtggacgtcgacgatatcgatcacttcggcaaccgtcgtatccgccaggtcggcgag
ctgattcagaaccagctgcgtaccggtctgagccgtatggagcgcgtggtgcgcgagcgt
atgaccactcaggacgccgaggccatcaccccgcagtccctgatcaacatccgtccggtg
aacgccaccatcaaggagttcttcggcacttcccagctctcccagttcatggatcagaac
aacccgctgtccggtgtgacgaacaagcgtcgtctttccgcactgggccccggcggtctg
tcccgcgaccgcgcctccatggaggtgcgcgacgtgcacccgtcccacttcggccgtatg
tgcccgatcgagtctcctgaaggcccgaacatcggtctgatcggctccctggcaaccttc
ggccgcgtcaacccgttcggcttcatcgagaccccgtaccgcaaggtcgtcaacggccac
gtgaccgacgaggtcgagtacatgaccgctgaccgcgatcttgaccacgtcattgcccag
gccaaccaggagctcgacgagaacggcaacttcgtgcagaagtccgcccttgcccgagtc
ggcgaagaagaggcggtcgatgtgccggtgagctccgtggactacatggacgtctccccg
cgccagatggtctccctcggcgcctccctgattccgttcctggagcatgatgagggccac
cgtgcactgatgggtaccaacatgcagcgtcaggccgtgccgctgatcgaatccgagcgc
ccgctggtgggcaccggctccgaatggcgcgccgccaacgactccggcgacgtcatcaag
tccgagaaggacggtgtggttacctacgtgtccgccgacctgatccgcgtgatgaacgac
gacggcaccaccagctcctacaagctggccaagttccagcgctccaaccagaccacctgc
tacaaccagcgcccgatcgtccacgacggcgagcgtgtggaagccggctcggttatggct
gacggccccgccatccagaacggcgacctggccctgggcaagaacctgctcatcgccttc
atgccgtggaacggctacaactacgaggatgctgtgatcatctcccagcgcctcgtgcag
gacgacaccctctcctccatccacatcgaggagtacgagatcgacgcccgcgaaaccaag
ctgggcgccgaagagatcacccgcgacctgccgaacgtcggcgaggacgccgtggccaac
ctcgacgagcgcggcatcatccgcattggcgccgaggtcgaggccggcgacatcctggtc
ggtaaggtcaccccgaagggcgagaccgagctgaccccggaggagcgcctgctgcgcgcc
atcttcggcgagaagtcccgcgaggtgcgtgacacctccctgcgcgtgccccacggcgag
accggtaccgtcatcggtgtcaaggagatcacccgtgaggatgccgaggaggacggcgac
gagctgcccaacggcgtcaaccagatgatccgcgtctacatcgcccagcaccgtaagatc
acggtgggcgacaagctctccggccgccacggcaacaagggctgcatctcccgcatcctg
ccggaagaggacatgccgttcctggctgacggtactccggtcgacatcatgctgaacccg
ctgggtgtgccttcccgaatgaaccttggccaggtgctcgaactgcacctcggctggatt
gctcactccggttgggacatctctttggatccgaatctggaagccgagtggaagaagctg
attccgtccggtgccgagaaggccgagccgaacaccccggtcgccaccccggtgttcgac
ggtgtcaagcctgaggtcctgaagggcctgctgtccaccacgctgccgaaccgcgacggc
gaccgtctggtcggccccgacggcaaggccaccctgttcgatggccgtaccggtgagccg
tacaccaagccgatttccgttggctacatgtacatgctgaagctgcaccacctggtcgac
gacaagattcatgctcgttccaccggcccgtactccatgatcacccagcagccgctcggt
ggtaaggcccagttcggtggccagcgcttcggcgagatggaggtgtgggcccttgaggcc
tacggcgccgcctacacgctgcacgagatgatgaccaccaagtccgatgacgtcgacggc
cgcgtgcgtgtctacggtgccatcgtcaagggcgataacctgccgccggcaggcatcccc
gagtcgttcaaggtgctcctgaaggaaatgcagtccctgtccctgaacgtcgaagtgctc
aacgccgaaggcgtggccatcgacatgaaggatgaggatgacgatccggccagctccgct
gacgacctcggcttcaacatcggcgcccgccccgacgcggccgccaaggaagaccagaag
gccgaagagcccgaataccagtga
DBGET
integrated database retrieval system
