Bifidobacterium animalis subsp. lactis Bl-04: Balac_1300
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Entry
Balac_1300 CDS
T00923
Name
(GenBank) Very short patch repair (Vsr endonuclease)
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
blc
Bifidobacterium animalis subsp. lactis Bl-04
Brite
KEGG Orthology (KO) [BR:
blc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blc03400
]
Balac_1300
DNA repair and recombination proteins [BR:
blc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Balac_1300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
RAP
DUF559
Motif
Other DBs
NCBI-ProteinID:
ACS46650
LinkDB
All DBs
Position
1499994..1500377
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AA seq
127 aa
AA seq
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MSRIRGKDTSIEKTVRSYLFARGFRFRKNDKRYPGHPDIVLPKYRTIVFVNGCFWHMHEG
CESFHMPKSNVEFWAAKLTRNRDRDRRQHEQLRQMGWRVIDVWECELRGDAREARLERLV
GQIAEGV
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcatccgcggcaaagacacgtcgatcgagaagacggtgcgctcctatctgttc
gcgcgcgggttcagattccgcaaaaacgacaagcggtaccccgggcaccccgacatcgtg
ctgcccaagtaccgcacaatcgtgtttgtgaacggctgtttctggcacatgcacgagggg
tgcgagtcgttccatatgccgaagtcgaatgtggagttctgggcggcgaagctcacgcgc
aaccgagaccgcgaccgccggcagcacgagcagctgcggcagatgggatggcgcgtgatc
gacgtgtgggaatgcgagctgcgcggcgacgcacgcgaagcgcggctcgagcgacttgtg
gggcagattgcggaaggggtgtag
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