Bifidobacterium animalis subsp. lactis Bl-04: Balac_1469
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Entry
Balac_1469 CDS
T00923
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
blc
Bifidobacterium animalis subsp. lactis Bl-04
Pathway
blc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Balac_1469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blc03021
]
Balac_1469
03019 Messenger RNA biogenesis [BR:
blc03019
]
Balac_1469
Transcription machinery [BR:
blc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Balac_1469
Messenger RNA biogenesis [BR:
blc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Balac_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
PIP5K
Spore_III_AA
SAP
Motif
Other DBs
NCBI-ProteinID:
ACS46816
LinkDB
All DBs
Position
complement(1726794..1728797)
Genome browser
AA seq
667 aa
AA seq
DB search
MKLPELKEIAKELGLRGLSAKRKGDLVAAIEEARAKQSSAKSETAPAQAEQPAGHDDAVS
VPVRKTGARRVVRKAGEPKAVEESAAEQPTQVKEEGHAALPAEEEMTQIRGRRVRGKRRQ
MESADQAATNGETSAAEQLLSTLNLPEHAERGGEQPRRRRGAVDSLPTRRRAGAAAVREP
DAEAKPDLDDILSSLPLSANDDESDERHEEHAHRRGERGSRTNDRSNARADRENRQHRRN
RNERDYEEREEGNERRSRDERGNNRNERNNRNDRNERREENTEDLVEVGGIVDVLDSYAF
IRTSGYLPGPNDIYVSMGQIKKYGLRKGDAVRGYTRAPHEGERRNQRQKFMPLQSITLIN
GLSVEEAQDRPNFSKLTPLYPDERLRMETTPNRIIGRLIDIVSPIGKGQRGLIVSPPKAG
KTITLQNIANAIAVNNPEVHLMVVLVDERPEEVTDMERTVKGEIISSTFDRPASDHTIVA
ELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGA
ARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAVDINAS
GTRREELITNPQELPVLYSLRRLLGGLEPEQAYQTLVPRLKKTMTNADFFKAIVQQGNSS
LNGGSNN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcctgagctcaaggagatcgccaaggaacttggcttgcgcggtctttctgcg
aagcgcaagggcgacttggtggcagcgatcgaagaggcccgcgccaagcagtcgtcggcg
aagagcgaaacggcaccggcacaggcggaacagcccgcagggcacgatgatgcagtctcc
gttccggttcgcaagaccggtgcccgacgcgtggtgcgcaaggccggcgagccaaaggca
gtcgaggagtctgctgccgaacagcctacccaggtgaaggaggagggccatgccgccctg
cccgccgaagaggagatgacccagattcgcggtcgccgcgtgcgcgggaagcgccgtcag
atggaatctgcggatcaggctgcgaccaatggtgagacgtccgccgccgagcagctgctg
agcacgctgaatctgcccgagcacgcagagcgcggcggtgagcagccacgtcgccgtcgc
ggtgccgtggactcactgcccacgcggcggcgtgcaggagcggcggccgtgcgtgaaccg
gatgcggaagccaagccggatctagacgacattctctcgtcattgccgctgagtgcgaat
gacgacgagagtgacgaacgtcacgaggagcatgcgcatcgccgtggcgagcgcggaagc
cgcaccaacgaccgttcaaatgcgcgtgccgacagggagaaccgccagcaccgcaggaac
cgcaacgaacgtgactacgaggagcgtgaggagggcaacgaacgccgttcccgcgacgaa
cgtggcaataatcgcaatgagcgcaacaatcgcaacgaccgcaatgagcgtcgcgaggag
aacaccgaggatctcgtggaggtcggcggcatcgtcgacgtgctcgattcctacgcgttc
attcgcacttccgggtacctgcccggaccgaacgacatctatgtgtcgatggggcagatc
aagaagtacggcctgcgcaaaggcgatgccgtgcgcggttacacgcgtgcgccccatgag
ggcgagcgccgcaaccagcgtcagaagttcatgccgttgcagtcgatcacgctcatcaac
ggcctaagcgtggaagaggcacaggatcgcccgaacttcagcaagctcacgccgttgtac
cccgacgagcgcctgcgtatggagaccacgccgaaccgcatcatcggccgcctgatcgac
atcgtttcgccgatcggcaagggccagcgcggcctgatcgtctctccgccgaaagctggc
aagacgatcacgctgcagaacatcgccaatgcgatcgctgtgaacaatcccgaggtgcac
ctcatggtcgtgctcgtcgatgaacgcccggaagaggtcaccgacatggagcgcaccgtg
aagggtgagatcatctcgtccaccttcgaccgcccggcctccgaccataccatcgtcgcc
gagctcgccatcgaacgcgccaagcgcctggtggagctggggcaggacgtggtggtgctg
ctcgattccatgacgcgcctcgcccgtgcctacaacatcgcggcacctgcctcagggcgc
atcctctccggtggtgtggacgcccaggcactctacccgccgaagaagttcttcggtgcc
gcccgcaacatcgaaaacggcggttcgctcaccatcatctcgtcggccctggtggagacc
ggttcgaagatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggagctg
cgtctgagtcgcgaactggccgacaagcgcctgttcccggctgtggacatcaatgcttcc
ggcacccgccgtgaggagctcatcacgaacccgcaggaacttccggtgttgtacagcctg
cgtcgcctgcttggcggcctggagcccgagcaggcctatcagacgctcgtgccgcgcctg
aagaagacgatgacgaatgcagacttcttcaaagcgatcgtgcaacagggcaacagctcg
ctgaacggcggctcgaacaactga
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