Bacillus licheniformis DSM 13 = ATCC 14580: BLi00096
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Entry
BLi00096 CDS
T00200
Symbol
yacF
Name
(GenBank) putative dihydrouridine synthase protein YacF
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bld03016
]
BLi00096 (yacF)
Transfer RNA biogenesis [BR:
bld03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
BLi00096 (yacF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Oxidored_FMN
DHO_dh
MR_MLE_C
G3P_antiterm
ThiG
NanE
SOR_SNZ
FMN_dh
PEP_mutase
NMO
Motif
Other DBs
NCBI-ProteinID:
AAU39073
LinkDB
All DBs
Position
92263..93264
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AA seq
333 aa
AA seq
DB search
MFKIGDIELKNRVVLAPMAGVCNSAFRLTVKEFGAGLVCAEMVSDKAILYNNAKTMGMLY
IDEREKPLSLQIFGGEKETLVEAAKFVDQNTTADIIDINMGCPVPKITKCDAGAKWLLDP
NKIYEMVSAVVEAVDKPVTVKMRMGWDEDHIFAVENARAVERAGGKAVALHGRTRVQMYE
GTANWDIIKEVKQSVSIPVIGNGDVKTPQDAKRMLDETGVDGVMIGRAALGNPWMIYRTV
HYLETGELKDEPKVREKISVCKLHLDRLIGLKGENVAVREMRKHAAWYLKGIRGNAKVRN
EINHCETRDELVQLLDAFTIEAEAKELQDAKVG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatcggtgatatagaattaaaaaacagggttgtgctcgcgccgatggccggt
gtctgcaactcagccttccgcttgacggttaaggaattcggagcgggtttggtctgcgcc
gaaatggtcagcgataaggcgatcctttacaataatgcgaaaacgatgggaatgctttat
atcgatgaacgtgaaaaaccgctcagcctgcagatcttcggcggagaaaaagaaacgctt
gtcgaagcggcgaagtttgttgaccaaaacacaactgcggatattattgatataaacatg
ggatgtccagtgccaaagatcacaaaatgtgatgcaggagccaaatggctgcttgatccg
aataaaatttatgaaatggtttcagctgtcgtggaggctgttgacaagcctgtgaccgtg
aaaatgagaatgggttgggacgaagaccatatctttgctgttgagaatgcgagagctgta
gaacgagcaggcggaaaagcggtcgctcttcacggacggacccgcgtgcaaatgtacgaa
ggaacggcgaactgggatattatcaaagaagtgaagcagtccgtttcaatccctgtaatc
ggaaacggtgatgtcaaaactccgcaagatgcaaaacgcatgcttgatgaaacaggggtg
gacggcgtcatgatcggccgtgcagcgctgggtaacccgtggatgatttaccgtacggtt
cactatttggaaacaggcgaattgaaagatgagccgaaagtgcgtgagaaaatttctgtc
tgcaaacttcaccttgaccgattaatcgggctgaaaggcgaaaatgttgcggttcgcgaa
atgagaaagcacgcagcctggtatctaaaaggcataagaggaaacgcaaaggtccggaat
gaaatcaaccattgcgaaacgagagatgagctcgttcagcttttagacgcgtttacgatt
gaagccgaggcaaaagagcttcaggatgcaaaagtaggataa
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