Bacillus licheniformis DSM 13 = ATCC 14580: BLi01376
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Entry
BLi01376 CDS
T00200
Symbol
yesW
Name
(GenBank) rhamnogalacturonan lyase YesW
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BLi01376 (yesW)
Enzymes [BR:
bld01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
BLi01376 (yesW)
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Beta-prop_CGLA
Motif
Other DBs
NCBI-ProteinID:
AAU40280
UniProt:
Q65KY4
Structure
PDB
PDBj
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All DBs
Position
1369006..1370874
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AA seq
622 aa
AA seq
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MKKGKKRWKNLLAASSLLLITLVTGFSEQAEADGRTAAQARQMESLNRGLVAVKTGNGVF
VSWRLLGTEPSSVSFNVYRNGKKLNGSPITSSTNYQDAGGDLNAVYQVRAVLNGREQAPS
ESVGVLNKQYKSVPLQKPAGGKTPDGVSYTYSANDASVGDLDGDGQYEIILKWDPSNSKD
NSQDGYTGDVLIDAYKLDGTMMWRINLGKNIRAGAHYTQFLVYDFDGDGKAEIAMKTADG
TKDGKGKVIGNANADYRNAQGRILSGPEYLTVFKGDTGAELTTVNYEPARGNVADWGDSY
GNRVDRFLAGVAYLDGERPSFVMARGYYTRTVLVAYNFRGGKLTKLWTFDSDAPGNGAYA
GQGNHSLSVADVDGDGKDEIIYGAMAVDHDGKGLYSTGWGHGDAMHTGNLDPSRPGLEVF
QVHENSNSPYGLSFRDAKTGKIIWGVHAGKDVGRGMAADIDPRYEGAEVWANGSLYTAKG
VKIGNTLPSSTNFGIWWDGDLQRELLDSNRIDKWDYQNSRTVNLLTASGASANNGTKATP
SLQADILGDWREEVVWRAEDSSELRIYTTTDVTEHRMYTLMHDAVYRLGIAWQNVGYNQP
PHTGFYLGEGMQTPEKPNIYTR
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggaaagaaaaggtggaagaacctgttggccgcgtcatctcttttattaatc
acgctagtgaccggcttctcggagcaagctgaggcagacgggcggacggctgcgcaggca
aggcaaatggaatcgcttaacagggggcttgtcgctgttaaaacggggaacggtgtcttt
gtcagctggcggcttctgggaaccgagccgtcttctgtttcatttaatgtgtatcgaaac
ggaaagaagctgaacggttctccgattacatcgagcacaaactatcaggatgcaggcggg
gatttgaacgccgtttaccaggtgcgcgccgttttgaacggcagggagcaggctccttct
gaatccgtcggcgtattgaataaacaatataaatctgttccgctgcaaaaaccggccgga
ggaaaaacgcctgatggggtgtcatacacatacagcgccaatgatgcgagcgtaggcgac
cttgatggagacggccaatatgaaatcattctcaagtgggatccttccaattcaaaggat
aattcacaggacggatacacgggagatgtgctgattgacgcatacaagcttgacggcacc
atgatgtggagaatcaaccttggcaaaaatattcgcgccggcgcccattatacgcagttt
ctcgtctatgactttgacggcgatggaaaagcggaaatcgccatgaagacggcagacggg
acgaaggacggcaaagggaaggtgatcggcaatgcaaacgccgattaccgcaatgcccaa
ggccgaattttgtcagggcctgagtatttgacggtttttaaaggcgatacaggcgctgag
cttacaacggtcaactacgaacctgcccggggaaatgtagccgattggggagacagctac
ggcaacagggttgaccgctttctggccggtgtcgcataccttgacggggagcggccgagt
tttgtcatggcacgcggttattacacgagaacagtgctagtcgcttacaacttcagaggc
ggaaagctgaccaagctgtggacgttcgattcggatgctcccggaaatggcgcctatgcc
ggtcaaggcaaccacagtttgagcgtcgccgacgttgacggagatggaaaggacgagatc
atatacggagcgatggctgtcgatcatgacggaaaaggcctctactcaaccggctgggga
catggggatgccatgcatacagggaacctggacccgtcaaggcctggactggaagtcttc
caagtccatgaaaacagcaattctccttatggcttgtccttccgcgatgcgaaaacagga
aagatcatctggggagttcacgcaggtaaagatgtcggacgcggaatggccgctgatatc
gatccgcgctacgaaggagcggaagtatgggcgaacggcagtctttatacggcaaaaggc
gtaaaaatcggaaacacattgccttcatcaacgaacttcggcatctggtgggacggcgat
ctccaaagagagcttctggacagcaacagaattgataaatgggattatcaaaattcgcga
accgtcaacttgctgacagcgtccggagcttcggcaaataacggaacaaaagcgacgccg
tccctgcaggcggacattctcggagactggcgcgaagaagtggtctggcgagcggaggac
agcagcgaactgcgcatctacacgacgacagacgtgacggagcaccgcatgtatacgctg
atgcatgatgcagtctatcgcctcggtatcgcctggcagaatgtcggctacaaccagcct
ccgcacaccggcttttatttaggcgaaggcatgcagacaccggagaagccgaacatttat
acacgctga
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