Bacillus licheniformis DSM 13 = ATCC 14580: BLi01925
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Entry
BLi01925 CDS
T00200
Symbol
ymcB
Name
(GenBank) tRNA methylthiotransferase YmcB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bld03016
]
BLi01925 (ymcB)
Enzymes [BR:
bld01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
BLi01925 (ymcB)
Transfer RNA biogenesis [BR:
bld03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
BLi01925 (ymcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AAU40819
UniProt:
Q65JE5
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All DBs
Position
1885354..1886883
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AA seq
509 aa
AA seq
DB search
MNEKQRIESGQVNPSDKKSEKDYSKYFEAVYVPPSLKDAKKRGKEEVKYHNDFKISEQFR
GMGEGRKFYIRTYGCQMNEHDTEVMAGIFMALGYEPTDSTEDANVILLNTCAIRENAENK
VFGEIGHLKALKKDNPDLILGVCGCMSQEESVVNRILKKHPFVDLIFGTHNIHRLPELLS
EAYLSKEMVIEVWSKEGDVIENLPKVRTGKIKGWVNIMYGCDKFCTYCIVPYTRGKERSR
RPEDIIQEVRRLAAEGYKEITLLGQNVNAYGKDFEDMEYGLGHLMDELRKIDIPRIRFTT
SHPRDFDDHLIEVLAKGGNLLDHIHLPVQSGSSDVLKLMARKYDRERYLELVAKIKKAMP
NASLTTDIIVGFPNETDEQFEETLSLYREVEFDSAYTFIYSPREGTPAAKMKDNVPMRVK
KERLQRLNEVVNEISAKKMKEYEGQVVEVLVEGESKNNPDILAGYTRKNKLVNFKGPKEA
IGQLVNVKIHQAKTWSLDGEMVGEAIEVK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaacagcgcattgaaagcggacaggtcaatccatcggacaaaaaatccgag
aaggattacagcaagtacttcgaagctgtttatgttccgccttcattaaaagatgcgaaa
aaacgcggcaaagaagaggttaaataccataacgattttaaaatctcagagcagttcaga
ggcatgggcgaaggacggaagttttacatccgcacgtacggctgccagatgaatgagcac
gataccgaagtgatggcagggattttcatggcgctcggctatgaaccgaccgactcgacg
gaagatgcaaacgtcattttgctcaacacgtgtgcgatccgggaaaacgcggaaaacaaa
gtgtttggcgaaatcggccatttaaaagctttgaaaaaagacaatccggatttgatcctc
ggagtctgcggatgtatgtcccaggaagaatcagtcgtcaaccggattttaaagaaacat
ccgttcgtcgatctgattttcggtacacacaatatccaccgcttgcccgaacttttgtca
gaggcttatctgtcaaaagaaatggtcatcgaagtgtggtctaaagaaggcgatgtcatt
gaaaaccttccgaaagtccgcaccggcaaaattaaaggctgggtcaacatcatgtacggc
tgcgacaagttctgtacgtactgcatcgtgccgtacacaagaggaaaagaacgaagcaga
cgtcctgaagacatcatccaggaagtgagaaggcttgcggctgaaggctacaaagaaatc
acgcttctcggacagaacgtcaacgcctacggcaaagattttgaggatatggaatacgga
ctcggccacttgatggatgaactccgcaaaatcgacattccgcgaatccgcttcacgaca
agccatccgcgcgattttgacgaccatctgatcgaggtgctcgcaaaaggcggaaacctt
ctggaccacatccatctgcctgtccagtccggaagctcggatgtcttgaaactgatggcg
cgcaaatacgaccgggagcgctatcttgagcttgtcgccaaaattaaaaaagcgatgccg
aacgcatccttaacaacggacattatcgtcggcttcccgaacgaaacagacgagcaattt
gaagaaacgctctctttatacagagaggttgaatttgacagcgcctatacgttcatctac
tcgcctcgcgaaggaacgcctgctgccaaaatgaaagacaatgttccgatgcgcgtgaaa
aaagaacggcttcagcggttaaatgaagtggtcaacgaaatttccgcgaagaaaatgaag
gaatatgaggggcaggttgtcgaagtgttagtagagggtgaaagtaaaaacaaccctgat
atccttgccggctatacacggaaaaacaagcttgtcaacttcaaaggaccaaaagaagcg
atcggccagcttgtcaacgtgaaaatccaccaggcgaaaacttggtcgcttgacggggaa
atggtaggagaagcaatcgaggtgaagtaa
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