Bacillus licheniformis DSM 13 = ATCC 14580: BLi03057
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Entry
BLi03057 CDS
T00200
Symbol
polA
Name
(GenBank) DNA polymerase 1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Pathway
bld03030
DNA replication
bld03410
Base excision repair
bld03420
Nucleotide excision repair
bld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLi03057 (polA)
03410 Base excision repair
BLi03057 (polA)
03420 Nucleotide excision repair
BLi03057 (polA)
03440 Homologous recombination
BLi03057 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bld03032
]
BLi03057 (polA)
03400 DNA repair and recombination proteins [BR:
bld03400
]
BLi03057 (polA)
Enzymes [BR:
bld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLi03057 (polA)
DNA replication proteins [BR:
bld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BLi03057 (polA)
DNA repair and recombination proteins [BR:
bld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BLi03057 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLi03057 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AAU41922
UniProt:
Q65G92
LinkDB
All DBs
Position
complement(2940321..2942960)
Genome browser
AA seq
879 aa
AA seq
DB search
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFTTILMKMLEEEKPTHMLVAF
DAGKTTFRHKTFKEYKGGRQKTPPELSEQLPFIRELLDAYRISRYELENYEADDIIGTLA
KSAEKDGFEVKIFSGDKDLTQLATEGTTVAITKKGITDVEYYTPEHVREKYGLTPEQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHTVEELLSSIDEVSGKKLKEKLEEFKEQAL
MSKELATITTEAPLEVSLDSLGYEGFDREAVVKIFKDLGFHSLLERIGEEAGEKEEEQLE
EIDVMIKTDITDDLFASPASLVVEQLGDNYHEAPILGFSIVNEHGAFFIPEETAVQSDCF
KEWAEDESKKKWVFDAKRAAVALRWRGIELKGAEFDVLLAAYIINPGHSYDDVASVAKEH
QLHIVSADEAVYGKGAKQAVPDEKELADHLARKAKAISLLREKLLDELEENEQLELFEAL
EMPLAHILGEMESIGVQVDVDRLKKMGEELSAKLAEYEKKIHESAGETFNINSPKQLGVI
LFDKLGLPVVKKTKTGYSTSADVLEKLRDKHVIIEDILHYRQIGKLQSTYVEGLLKVIKK
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSQKGWLIFAADYSQI
ELRVLAHISKDKNLIEAFTNDMDVHTKTAMDVFHVSEEEVTPAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAAAFIERYFHSFQGVKEYMEETVQEAKQRGYVTTLLSRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMADKLKEKNLQAKLLLQVHDELIFEAP
EDEIKVLEKLVPEVMEHALELDVPLKVDCASGPSWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagaaaaaaattagtattggttgacggaaacagcctggcttaccgtgcgttt
ttcgccctgcctcttctcagcaatgaaaaagggatacatacaaacgcggtgtacggtttt
accacgatcttaatgaagatgcttgaagaggaaaaaccgacccacatgctcgtcgctttt
gatgcggggaaaacgacattcagacataaaacgtttaaagaatataaaggcggcagacaa
aaaacgccgccggagctgtcagagcaattgccgtttatccgcgagctgctcgacgcatat
agaatctcaaggtatgagcttgaaaactacgaggccgatgatattatcggcacccttgcc
aaatcagcggaaaaagacggatttgaagtgaagattttttccggcgacaaggacctgaca
cagctggctacagaaggaacgacggtcgccatcacaaaaaagggcattacagatgtcgaa
tactatacgcctgaacatgtccgggaaaagtacggacttacccctgaacagatcattgat
atgaaagggctgatgggagactcgtcagacaatattccaggcgtgccgggagtcggcgaa
aagacggcgatcaagcttttgaaacagttccatacagtagaggagctgctgtcgtcaata
gacgaagtcagcggaaaaaaactgaaagaaaagcttgaagaatttaaagaacaggctttg
atgagcaaagagcttgcgacgattacgacagaagcgccgcttgaagtcagcctcgattcc
ctcggatatgaaggttttgacagggaagcggtcgtcaagatttttaaagatctcggcttt
cattctttgctcgaaaggattggcgaagaggcgggagagaaagaagaagaacagttggaa
gagatcgatgtcatgatcaaaacagacatcacggatgacttgtttgcgtcaccggcttca
ctcgtagtcgaacagctcggcgacaattatcacgaggcgccgatcctcggtttttcgatc
gtcaacgaacacggcgctttcttcattccggaagagacggccgttcagtcggactgtttt
aaagaatgggccgaagatgagtcgaaaaagaaatgggtgtttgatgcaaaacgtgcggcg
gtcgctttgcgctggcggggcattgaactgaaaggcgctgagtttgacgttcttcttgcg
gcctatatcatcaacccggggcactcctacgatgatgtggcaagcgttgcgaaagaacat
caattacacatcgtttcagcagatgaagcggtctacggaaaaggagcgaaacaggcggtt
ccggatgagaaggagcttgccgaccatttagccagaaaggcgaaggcgatatcgctgctg
cgcgaaaagctccttgatgaactggaagaaaacgagcagctcgaactgtttgaagcgctc
gaaatgcccctcgcccacattctcggtgagatggaatcgatcggtgtccaagtcgatgtc
gacagactgaaaaaaatgggtgaagaactgtccgctaaattagcggaatacgagaaaaaa
atccacgagtcagcaggtgaaaccttcaacattaattcaccaaagcagctcggtgtgatt
ttgtttgataaactcgggctgcctgtcgtcaaaaaaacaaaaacgggctattcaacttca
gccgatgtgcttgaaaagctgcgcgataaacatgtcattatcgaagatatcctgcactac
aggcagattggcaagctccagtccacatacgtagaagggcttttgaaagtgatcaaaaaa
gacagccataaagtgcatacccgctttaatcaagctttaacacagacgggaaggctcagc
tcaaccgatccgaatctgcaaaatataccgatccgccttgaggagggccgcaaaatccgg
caggcgtttgtcccttcgcaaaaaggctggctcatatttgcggcggattactcacagatc
gagctgagggttctcgcccacatttcaaaggataaaaatttgattgaagcgttcacgaac
gatatggacgttcacacaaaaacggcgatggacgtttttcatgtatcagaagaagaagtc
acccctgcgatgagaaggcaggcgaaagcagtcaatttcggaatcgtctacggaatcagc
gactacggcttgtcgcaaaacctgggaattacaagaaaggaagcggcagcgtttattgag
cgctatttccacagcttccagggagtcaaagaatacatggaagagaccgttcaggaagcg
aagcagcgaggctatgtaacgactcttttaagccggaggcggtatataccggaattgacg
agccggaatttcaatctgcgcagctttgccgaacggacggcgatgaacacaccgatccag
ggaagcgccgcagatattattaaaaaagcgatgatcgacatggcggacaagctgaaagaa
aaaaatctccaggccaaactgctgctgcaggttcatgacgaattgatttttgaagcgcct
gaagatgaaatcaaagtgcttgaaaaactggttccggaagtcatggaacatgcattggag
ctcgatgttccactgaaagtggactgcgcttcagggccttcatggtacgatgcaaaatag
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