Bacillus licheniformis DSM 13 = ATCC 14580: BLi03956
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Entry
BLi03956 CDS
T00200
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bld
Bacillus licheniformis DSM 13 = ATCC 14580
Pathway
bld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLi03956 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bld03021
]
BLi03956 (rho)
03019 Messenger RNA biogenesis [BR:
bld03019
]
BLi03956 (rho)
Transcription machinery [BR:
bld03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BLi03956 (rho)
Messenger RNA biogenesis [BR:
bld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLi03956 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
NACHT
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AAU42770
UniProt:
Q65DU4
LinkDB
All DBs
Position
complement(3780008..3781291)
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKVSYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQMVLETKPNHLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPGAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWSIRKTMSDTPDFVEKFMRKMKKTKTNQEFFDILIQEWKQA
NMSAARR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatgtatccatttcatctttggaaaatatgaaattaaaagagctgtatgagctt
gcaaggcattataaagtctcttattacagcaaactgacaaaaaaggaactgatttttgcc
attctgaaagcaaacgccgaacaggaagatctgctgttcatggaaggcgtattggaaatc
atccagtccgaagggttcggctttctcagaccgatcaactactcgcctagttcagaggat
atctatatttccgcctcacaaatccgccgttttgatttgagaaacggtgataaagtgtcc
ggaaaggtccgccctccaaaagaaaacgaacggtattacggcctgctgcacgttgaagcg
gttaacggcgacgatcctgaatcagcaaaagaacgcgtgcactttccggcattaacgcct
ctttatccagatcgccagatggtgcttgaaacgaagccgaatcacctgtcaacacggatc
atggacatgatggcgccggtcggctttggacagcgcggtctgatcgtcgctccgcctaaa
gcgggtaaaaccatgctcttgaaagagatcgcgaacagcatcacaaccaatcatccggaa
gcggagctgatcgtgcttcttatcgatgaaagacctgaggaagtgaccgacatcgaacgt
tcggttgcaggagacgttgtcagctcaacgtttgacgaagttcctgaaaaccatatcaag
gtggccgagcttgtattggaacgtgcaatgaggcttgttgagcataaaaaggacgttatc
attttaatggacagcattacaaggcttgcccgcgcctataaccttgtcattccgccgagc
ggcagaacgttgtccgggggaatcgatcccggcgctttccaccgtccaaagcgtttcttt
ggagcagcccgcaacattgaagagggcggcagcttaacgatcctggcgaccgctctcgtc
gacacgggctcgcggatggatgacgtcatctatgaggaatttaaaggaacagggaacatg
gagcttcatcttgaccgttctcttgcggaaagaagaatctttcctgccattgatattcgc
cgttcgggtacgcgtaaagaagagcttctcgttccgaaagagcaccttgatcgtctgtgg
tcaatccggaaaacgatgtctgacacgcctgacttcgtcgagaaattcatgagaaaaatg
aaaaagacgaaaacgaatcaggagtttttcgatattctgatccaggaatggaaacaagcc
aatatgtctgctgcaaggcgctga
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