Shouchella lehensis: BleG1_0026
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Entry
BleG1_0026 CDS
T03204
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ble
Shouchella lehensis
Pathway
ble03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ble00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BleG1_0026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ble03021
]
BleG1_0026
03400 DNA repair and recombination proteins [BR:
ble03400
]
BleG1_0026
Enzymes [BR:
ble01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BleG1_0026
Transcription machinery [BR:
ble03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BleG1_0026
DNA repair and recombination proteins [BR:
ble03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BleG1_0026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AIC92646
UniProt:
A0A060LMR8
LinkDB
All DBs
Position
21885..25427
Genome browser
AA seq
1180 aa
AA seq
DB search
MTGQLIQYGRHRQRRSYARINEVLDLPNLIEIQTASYQWFLDEGLREMFQDISPIQDFTG
NLVLEFIDYSLGEPKYPVDESKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSQKLDKNGKKGFTATVIPNRGAWLELETDAKDIV
YVRIDRTRKIPVSVLLRALGFGSDQEIIDLLGENEYLRATLEKDNTDSTDKALLEIYERL
RPGEPPTVENAKSLLESRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAEKLVDPETG
EVLAEEGTLLDRRTLDKLIPHLEKNVGFRTARTSGGVLEESDVDIQSIRIQAADDLDEER
TISVIGNGMVDRDVKHIAPSDIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDPNVITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAE
LTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNE
FGFMETPYRRVDPETGKVTARIDYLTADEEDNYVVAQANAKLNDDGSFMDENIIARFRGE
NTVVPFERIDYMDVSPKQVVSAATSCIPFLENDDSNRALMGANMQRQAVPLLVPEAPLVG
TGMEHMSAKDSGAAVVSKYPGEVERVTAKEIWVRRIEEVDGKQVKGDLDKYRLQKFIRSN
QGTSYNQRPIVREGDVVEKREILADGPSMEQGEMALGRNVLVGFMTWEGYNYEDAIILSE
RLVKDDVYTSVHIEEYESDARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRAPHGGDGIVLDVKIFNREDGD
ELPPGVNQLVRVYIVQKRKINQGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNP
LGVPSRMNIGQVLELHLGMAARKLGIHVASPVFDGAREEDVWGTLDEAGMARDGKTILYD
GRTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLG
MDVKMLSSNEEEIEMRELDDEDEQTSEKLNLQLETNESQA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactaattcagtatggacgtcaccgccagcgaagaagctatgcgcgaatt
aatgaagtgctggatctgccaaacttaattgaaattcaaacagcttcctatcaatggttt
cttgatgagggtttaagagaaatgtttcaagatatttctccaatccaagactttacaggt
aatctagtcttggaatttattgactacagcttgggcgaacctaaatacccagttgatgag
tcaaaagaacgtgatgtaacgtacgctgctccacttagagtaaaagtacgtttaatcaac
aaagaaacaggtgaagtaaaagagcaagaagtgttcatgggagattttcctcttatgacg
gagacaggcacgtttgtcattaatggagctgaacgtgttattgtatctcagcttgttcgt
tcaccgagtgtgtactacagccaaaaacttgataaaaacggtaaaaaagggtttacagct
accgttattccgaatcgcggtgcgtggcttgagcttgaaacagatgctaaagacatcgtt
tatgttcgtatcgaccgtacaagaaagattcctgtatcggtattactgcgtgcgctaggt
tttggttctgatcaagaaatcattgaccttttaggtgaaaatgagtacttgcgtgcgacc
cttgaaaaagataatacagattcaacggataaagcgctattagaaatttacgagcgccta
cgtccaggagagccgccaaccgttgaaaatgcaaagagcttattagaatctcgtttcttt
gatccaaagcgctatgatttagcgaatgttggacgttacaagattaataaaaagcttcac
ataaaaaatcgcctgtttaatcaacgtttagccgaaaagcttgttgatcctgaaacaggt
gaagtacttgcagaagaaggtacgttactggaccgtcgtacattggataagttgatccct
catttagagaaaaatgttggtttccgtacagctcgtacgtctggtggagtattagaagaa
tcggatgtagacattcagtctattcgcattcaagctgcagatgaccttgatgaagaaaga
acgatttccgttattggtaatggaatggttgatcgcgatgtgaagcacattgctccttct
gacatcattgcatctatcagctacttctttaacttgttacatggtgtaggtgacacggat
gatattgatcaccttggtaaccgtcgtttgcgttctgtaggggaacttctacaaaaccag
ttccgtattggtctttctcgtatggagcgtgtggttcgtgaacgtatgtcaattcaagac
ccgaatgtcattacgccacaggcacttattaacattcgccctgttattgcatctattaaa
gagttctttggtagctctcagctttctcagttcatggaccaaacaaatcctcttgccgag
ttaacgcataagcgtcgtctttctgcactcggaccaggtggtttaacccgtgaacgtgct
ggtatggaagtgcgagatgttcattactctcactatggtcgtatgtgtccaattgaaaca
ccagagggtccaaacattggtctaattaactccctatcttcttatgcaaaagtaaatgag
tttggttttatggagacaccgtatcgtcgtgtggaccctgagacaggtaaagtaacagct
cgtattgattacttaactgcagatgaagaagataattatgtagtcgctcaagcgaatgcg
aaattaaatgatgatggttccttcatggatgaaaacattattgctcgtttccgtggtgaa
aacaccgttgttcctttcgaaagaattgattatatggatgtatcgccgaaacaagttgta
tctgcggctacgtcgtgtattcctttcttagagaatgatgactccaaccgtgcccttatg
ggagcgaatatgcagcgtcaagctgttccgttgcttgtacctgaagcaccacttgttggt
acagggatggagcatatgtctgcgaaagattctggtgctgcagttgtgtcgaaataccct
ggtgaagtagagcgcgttacggcaaaagaaatttgggtacgccgtatagaagaagtagat
ggtaaacaggtaaaaggggatcttgataaatatcgcctacaaaagtttatccgctcgaac
caaggaacaagctacaaccagcgtccaatcgttcgtgaaggtgacgttgttgaaaaacgt
gagattcttgcagatggtccttctatggaacaaggcgaaatggctcttggtcgtaacgta
cttgttggctttatgacatgggaaggttacaactatgaggatgctattattttaagtgag
cgtcttgttaaagatgacgtgtatacatctgttcatatagaagagtatgaaagtgatgct
cgtgatacaaagcttggacctgaagaaattacaagagacattccaaacgtcggtgaagat
gcactacgcaaccttgacgaacgtggaatcatccgtgttggtgcagaagtaaaagatggc
gatattcttgttggaaaggttactccaaaaggggttacagaactaacggctgaagagcgt
cttttacatgccatctttggtgagaaagcccgtgaagttcgtgatacttctttacgtgca
ccacacggtggagacggtatcgtactggatgtgaaaatctttaatcgtgaagatggagat
gagttgccacctggtgtgaatcagcttgtacgagtttatatcgtacagaagcgtaagatt
aaccaaggtgataagatggccggacgtcacggtaacaaaggtgtaatctcacgtatcctc
ccagaagaggatatgccgtatcttccagacggaacaccaattgatatcatgttaaaccca
ttaggggtaccatcacgaatgaacatcggacaagtgcttgagcttcatttaggaatggca
gctcgtaagcttggtattcacgttgcatcaccagtatttgatggcgctcgtgaagaagat
gtttggggaaccctcgatgaagcgggtatggctcgtgacggtaaaacaatcctttatgac
ggacgtacaggtgagccgtttgacaaccgtgtttctgtagggatcatgtatatgattaaa
cttgcgcacatggttgatgataagcttcacgcacgttcaacaggtccttactctcttgtt
acacagcaaccactaggtggtaaagctcagttcggtggacagcgtttcggagagatggaa
gtatgggcacttgaagcctacggtgctgcttacacactacaagagattttaacggtgaaa
tcagatgatgttgtaggtcgtgtgaaaacgtatgaagcaatcgttaaaggtgaaaatgtt
cctgaacctggcgttcctgaatcgttcaaagtattaatcaaagaacttcagtcccttggt
atggacgttaagatgctttcgagtaatgaagaagaaatagaaatgagagaattagacgat
gaagatgaacaaacatctgaaaagctaaatctccaattagaaacaaacgaatcacaagct
taa
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