Entry |
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Name |
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
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KO |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:ble00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ble03019]
BleG1_1500
03009 Ribosome biogenesis [BR:ble03009]
BleG1_1500
Enzymes [BR:ble01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BleG1_1500
Messenger RNA biogenesis [BR:ble03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BleG1_1500
Ribosome biogenesis [BR:ble03009]
Prokaryotic type
rRNA helicases
BleG1_1500
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1459238..1460596
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AA seq |
452 aa
MNAENFSRLGITDKLQQALVDANISKPTEIQERLIPAILNKKDVIGQSQTGTGKTFAFLL
PLIEQITVTEANVQAIVTAPTRELANQLYNEVVKLLKPFDGEIQAQLYVGGTDRQKQMDR
LKSKQPHLVVGTPGRINDLIQQNALLAHTATTLIVDEADQMLDMGFIEDVDKVAGKMAEE
LQMLVFSATIPEKLQPFLKKYMSQPRHVHVQPEALAAKAVKHQLVPVRHKDKMTVLKDVV
KHINPYLAIIFVNTKEQADFVADELAKESLNVERLHGGLASRERRKVMKKVDDASVQFLV
ASDLAARGMDIKGVTHVINFEFPADLDFYVHRVGRTARAGADGIALSLFEKTDEYACGKL
SSKGISFTFVEFKDGEWQQVKGPIGSGGFSQQKPQSGEKKKADKTATKPQERTGGKAKAK
PKKVKPAYKRKARVAQEKRNKRDNKLRSRKSK |
NT seq |
1359 nt +upstreamnt +downstreamnt
atgaatgcagaaaatttttcaagactcggaataacggataaattacaacaagcacttgtt
gatgccaacatatctaaaccaacggaaatacaagaacggttaatcccagcaattttaaac
aaaaaggatgttatcggccagtctcaaacaggtacaggaaaaacgtttgcgtttctgtta
ccgcttattgaacaaataacggttacggaagcaaatgtacaagctattgtgactgcccca
acaagagaattagctaaccagctttataatgaagtggtaaagctactaaagccctttgat
ggggagattcaagcacaattatatgttgggggtacagatcgccaaaagcagatggatcgt
ttgaagtcaaaacaaccacatcttgttgttggtacaccaggaagaattaatgatttaatc
caacaaaatgcgctattagcacatacagccactactctcattgtagatgaggcggatcaa
atgctcgacatgggctttattgaggatgtagacaaagtagctggtaaaatggcggaagag
ctacaaatgttggttttctcggccactataccggaaaaacttcagccatttttaaagaaa
tatatgtcccaaccacgtcacgttcatgtacagcctgaagcattagctgcaaaagcagtt
aaacatcagcttgttccagtgcgacataaagataaaatgactgttcttaaagatgttgtg
aagcacattaatccatatttagcaattatttttgtgaacacaaaagagcaagcggatttt
gtggcggatgaattggcaaaagaatcgttaaatgttgagcgtttgcacggaggccttgca
tcgagagagcgacggaaggtaatgaaaaaagttgatgatgcaagtgttcagttccttgtg
gcttcagatttagctgctcgagggatggatatcaagggtgtcactcatgttattaacttt
gaatttccagcggatttagatttttatgtacatcgtgttggacgtacagctagagctggt
gcagatggtatagccttatcgctatttgaaaaaacagatgaatacgcgtgtggtaagcta
tcaagtaaaggcatatcctttacatttgtcgagtttaaagacggggaatggcaacaagta
aaaggtccaattggtagtggcggcttttcacaacagaaacctcagtctggggaaaagaaa
aaagcagataaaacggcaacaaagccacaagagcgaacaggtggaaaagctaaagcaaaa
ccaaaaaaggtaaagcctgcttataaaagaaaagcacgtgttgcgcaagagaagcgcaat
aagagagataacaaattacgttcccgtaaaagtaagtaa |