Shouchella lehensis: BleG1_2188
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Entry
BleG1_2188 CDS
T03204
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ble
Shouchella lehensis
Pathway
ble03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ble00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BleG1_2188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ble03019
]
BleG1_2188
03009 Ribosome biogenesis [BR:
ble03009
]
BleG1_2188
Enzymes [BR:
ble01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BleG1_2188
Messenger RNA biogenesis [BR:
ble03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BleG1_2188
Ribosome biogenesis [BR:
ble03009
]
Prokaryotic type
rRNA helicases
BleG1_2188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AIC94766
UniProt:
A0A060LU57
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All DBs
Position
complement(2138144..2139760)
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AA seq
538 aa
AA seq
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MTFFSDFEISDQVKQAIKEMGFEEPSPIQEKAIPAILTGGDVIGQAQTGTGKTAAFGIPV
VDKVTSDRAIQALILTPTRELAIQVAGELQKLSMHKAIRTLPIYGGQSIGHQIKALKQGV
QIVIGTPGRMLDHLRRGTLKLQSVHTVVLDEADEMLDMGFVEDIEAILKEVNDVRQTLLF
SATMPPAIRKLSRNYMNNPSTVTINKGEVTAPSINQVYYKVLERNKIDSLCRIIDSDDVD
LGILFCRTKKGVAELTEALQARGYLADGLHGDLTQSQRDVVMKKFRDSSIEFLIATDVAA
RGIDVENVSHVINFDIPQDPESYVHRIGRTGRAGRTGAAITLVTPREMKHLRSIEKEIKM
YIPSQEVPTIEDVVEKQQTSWKNLIKETIETGGKEMELFRPLADQMLEEEVDAKEIISAL
LKLKFSTETASEDAGYSFGETGGAKGMVRFFINVGRNVNLTPKILGDEISRLIGIPVKTI
GRIDIFDNFSFVDVPEESAPFAYEGLRYSRINGARVNLEPAKPRPKRERRPHAAGRRS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacatttttttcagacttcgagatttcagaccaagtaaaacaagcaattaaggagatg
ggatttgaagaaccttctccgattcaggaaaaagccatcccggctattcttactggaggc
gacgttattggccaggctcaaacaggaactgggaaaacagcggcttttggtattcctgtt
gtggataaagtaacaagtgatcgggccattcaagcgcttattttaacgccgacgcgtgag
cttgctattcaagtggcaggcgaactacaaaaattgtctatgcacaaagcaattcgcacg
ctaccgatatatggtgggcagtcaatcggtcatcaaattaaagcactaaaacaaggtgtt
caaattgttatcggaacaccaggtcgaatgcttgaccatttgcgtcgggggactctaaag
cttcaatctgttcatacagttgtacttgatgaagccgatgaaatgcttgatatgggtttt
gttgaagatattgaagcaattttaaaagaagtaaatgatgtaagacaaacgcttctgttt
tcagcgacaatgccaccagccatccgtaagttgtcacgaaattatatgaacaacccttcg
actgtaacgattaataaaggagaagtaacggctccttcaatcaatcaagtgtattataaa
gtactagaacgtaacaaaatcgactccctatgtcggatcattgatagcgatgatgttgat
cttggcattttattctgccgtacgaaaaaaggagttgctgaattaacagaagccctacag
gcaagaggatatttagcagacggtttacatggagatcttacacagtctcagcgtgatgtc
gtgatgaaaaaattccgtgattcttccattgaatttttaattgcaacagatgtagcagct
cgtggaatcgatgttgaaaacgtaagtcacgttattaacttcgatattccacaagatcca
gagagttatgttcaccgcattggtcgaacaggtcgtgcaggtcgcacaggtgccgcaatt
acgcttgttacgcctagggaaatgaagcacttgcgttcaatcgaaaaagaaattaaaatg
tacatcccatctcaagaagtaccaacaattgaagatgtagtcgaaaaacaacaaacgtca
tggaagaatttgattaaagaaacgattgaaactggtggaaaagagatggaattattccgt
ccactggctgatcaaatgctagaagaggaagtcgatgcaaaagaaatcatctctgcatta
ttgaaactgaagttctcaactgaaacagcaagtgaggatgcaggctatagctttggtgaa
acaggtggagcaaaaggaatggttcgtttctttattaatgttggtcgcaacgttaattta
acgccgaagattctaggtgatgaaattagtcgcttaattggtattccagtgaaaacaatt
ggccggattgatatttttgataatttctcgtttgtcgatgtaccggaagagagcgcccca
tttgcatatgaagggttgcgctattcgagaattaatggtgctagagtaaacttagagccg
gcaaagccgcgtcctaagcgcgagcgtcgtcctcatgctgcaggtcgccgctcttaa
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