Shouchella lehensis: BleG1_2200
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Entry
BleG1_2200 CDS
T03204
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ble
Shouchella lehensis
Pathway
ble03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ble00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BleG1_2200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ble03019
]
BleG1_2200
Messenger RNA biogenesis [BR:
ble03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BleG1_2200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AIC94778
UniProt:
A0A060M2J7
LinkDB
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Position
complement(2150821..2152494)
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AA seq
557 aa
AA seq
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MSKQEIENGKVRVFALGGVGEIGKNMYGIEVDEDIIVVDAGLMFPDDDMLGVDIVIPDVS
YLVENEERVKGIILTHGHEDHIGGLSYVLKKINVPVYGTKLTLGLVEEKLKEAGILKETT
LRLIDSNSRVKLGKTPVSFFRTSHSIPDCVGVCIETSQGAVVHTGDFKFDQTPVDGKHAE
IGKMAAIGQKGVLCLLSDSTNAERPGTTKSEAEVGIGIKDVFARTSGRLIVTSFASNVHR
LQQVIQATAAANRKLSIVGKSMVRVITIASKLGYLKMPKDLVIDIDEVNRYKPEQVVILT
TGSQGEPMSALTRMARGAHRHITITENDTVIIAASAIPGNEKSVSSVIDQLHRIGADVVY
GSQAVHASGHGSQEELKLMLNLMKPKYFLPIHGEIRMQHAHRDLGMNVGIKPERIYIVEK
GEVVEFSNNQARRAGKVPSGHVLIDGLGVGDVGNIVLRDRRLLSKDGILVVVVTLNKKTS
TIVSGPNIISRGFVYVRESEALLDQSNELVSSILQKCVTENVSEWSSLKSNIREGLSRFL
FEKTKRRPMILPIIMEV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaagcaagaaatagaaaacggaaaagtccgagtgtttgccctcggaggtgtagga
gaaattggaaaaaacatgtacggcattgaagtcgatgaagacattattgttgttgatgct
gggttaatgttccctgacgatgacatgcttggtgtcgacattgtcattccagatgtttcg
tacttagtagaaaacgaagaacgagtaaaaggaattattttaacacatggtcatgaagac
cacattggtggcttgtcttatgtgttaaagaaaataaatgtgcctgtctatggtacaaaa
ttaaccctaggtttagtagaagaaaaattaaaagaagcaggcattttaaaagaaaccacc
cttcgcttaattgattctaattcaagagtaaaactagggaaaacacctgtatcatttttc
cgtacaagccatagtatccctgattgtgtaggcgtatgtattgaaacatctcaaggtgca
gtggttcatacgggagactttaagtttgaccaaacaccagttgatggaaaacatgctgaa
attggtaaaatggcggcaattggtcaaaaaggtgtactctgcttactttcagactcaacg
aacgcagaacgaccaggaacgacgaagtctgaagcagaagtcggtattggtattaaagat
gtatttgcacgaacatcaggacgtttaattgttacctctttcgcttcaaatgtgcaccgc
ttacagcaagtgattcaagcgacagctgctgcgaaccgtaaattgtccatcgttggaaag
agtatggttcgcgtcattaccattgcttctaagttaggctatttaaagatgcctaaggat
ctggttatcgatattgatgaagtcaatcgctataagccagagcaagttgtcattttaact
acaggtagccaaggggagccaatgtctgctttgacaaggatggcaagaggcgcgcaccgt
cacattaccataacagaaaatgacacggttattattgcggcgtctgcgattccagggaat
gaaaaaagcgtttcttctgtcattgatcaacttcatcggattggtgctgatgttgtttat
gggtcgcaggctgtacacgcttcaggtcatggttctcaagaagaactcaagctaatgctt
aatttaatgaagccgaaatatttcttgcctattcacggtgagattcgtatgcagcacgct
cacagagacctaggaatgaacgttggtataaagccggagcgtatttatatcgttgaaaaa
ggtgaagtggtcgagttttcaaacaatcaagcacgccgcgcagggaaagttccttctgga
cacgtccttattgatggtcttggggttggtgacgttggtaatattgtgttaagagatcgt
cgtttgctttcaaaagatggaattcttgttgttgttgttacattaaacaaaaagacaagt
acgattgtgtctggtccaaatattatttctcgtggttttgtatatgtacgtgaatcggaa
gccttacttgatcagtctaacgagttggtgtcgtcgattttacaaaagtgtgtgacggaa
aatgtaagcgagtggtctagtttaaagagcaacattcgcgaagggctaagccgattcttg
tttgaaaaaacaaagcgtcgtccaatgatcttaccaattattatggaagtgtaa
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