Bifidobacterium lemurum: BL8807_00500
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Entry
BL8807_00500 CDS
T06861
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blem
Bifidobacterium lemurum
Pathway
blem03030
DNA replication
blem03430
Mismatch repair
blem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BL8807_00500 (dnaE)
03430 Mismatch repair
BL8807_00500 (dnaE)
03440 Homologous recombination
BL8807_00500 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blem03032
]
BL8807_00500 (dnaE)
03400 DNA repair and recombination proteins [BR:
blem03400
]
BL8807_00500 (dnaE)
Enzymes [BR:
blem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BL8807_00500 (dnaE)
DNA replication proteins [BR:
blem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BL8807_00500 (dnaE)
DNA repair and recombination proteins [BR:
blem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BL8807_00500 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DUF1264
DUF5487
Motif
Other DBs
NCBI-ProteinID:
QOL34455
LinkDB
All DBs
Position
complement(115979..119554)
Genome browser
AA seq
1191 aa
AA seq
DB search
MAESGNFVHLHNHTHYSLLDGASKIPELAKRAAELGMPAVGISDHGNMHGAYEMFTECVK
ANVKPIIGIEAYVTPETARQDPTRVSWDTTWDKSLHGGKRNPDDVSGGGLITHLTLWAEN
DEGLVNLLKASSVANLEGRVQRYPRMDKEVLSTYSKGVICGSGCPSGIIQTRLALGQFDE
ALRAAGEMQDIFGRDNFFIEIMDHNLTIEKRNVPGLLEIAKKLNAPLLATNDAHYVLESG
AEAQDAMLCINSGSRLDEPGRFKFDGSGYYIKSAQEMRELFKEFPGACDNTLAIAERCNV
IFGDNEDGAFMPQFPCPEGWDETSLFLKQVEEGLERRYDGNVPIDVLQQADYECGVICQM
QFCGYFLVVADYIQWAKDHGIMVGPGRGSAAGSMVAYAMGITELDPLQHGLIFERFLNPE
RVSLPDIDVDFDPEGRMRVIEYCGEKYGHDKVAQCVIYGTIKTKQALKDSARIMGYEYSM
GEQITKALPPSKNGKDASLSEIFDPTSKRYAEAREFREFYDSNPDAKQITEKAKGIEGLI
RQTGVHACATIMGSAPITDTSPLLERVDGTVTTTFEYHTCETLGLVKMDFLGLSNLTVIH
DTLKNIEANGKPAIDYTKIPLDDKETYQLLSRGDTLGVFQLDSDGMRALLRTLRPDNFND
ISALIALYRPGPMDMDSHNNYAKRKNGLQKIEPIHPELEEPLKEILDETYGLIVYQEQVQ
AAARKLAGYSLGKADVLRRAMGKKKPEVLAKEKIPFFEGMKEHGYSEESAQAVWDVLVPF
SGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGTKDNKDKTALYLGEARRMGIQV
LSPDVNESVYEYSAVGDVVRFGLGAIRNVGDKAVADIIAERSGERGKFVNFMDYIRRVPL
TAINRRLVESLIKAGAFDSIDPNRRALFTVHETAIESVMGLKRKEAEGQFDLFADMDDGG
GEDMGDASVSVPDLEEWDKSTKLNFEREMLGLYVSDHPLSGMQSVLASLREVSIAQLIDR
AKTMGAGQQVTLAGLVTGVDRRVSKKGNAWAIVTIEDLESSIQCMFFGKVYESNAADLVL
DKVVQIRGQVELRDETVSMRATEMQVPTLEAEDERPLVLTLPVGALDRNHMMQLGQVLTS
HPGYCEVKLAVLDDKGNAKVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcgggaaacttcgtacatctgcacaaccacacgcattactcgctgctggac
ggggcttcgaaaatcccggaattggcgaaacgcgcggcggaactgggcatgcccgcggtc
ggcatctccgaccacggcaacatgcacggcgcgtacgagatgttcaccgaatgcgtgaag
gccaacgtcaaaccgatcatcggcatcgaagcgtatgtgacgcctgagaccgcgcgccag
gatcccacccgcgtgagctgggacaccacatgggacaaaagcctgcacggcggcaaacgc
aatcccgacgacgtctccggcggcggcctgatcacccacctcaccctgtgggcggagaac
gacgaaggcctggtcaatctgctcaaggcgtcctcggtggccaacctcgaaggccgcgtg
cagcgctatccccgtatggacaaggaagtgctctccacctactccaaaggtgtgatctgc
ggatccggctgtccctcgggcatcatccagacccgtctggccctcggccagttcgacgag
gcgctgcgcgcggccggcgagatgcaggacatcttcggtcgcgacaacttcttcatcgaa
atcatggaccacaacctgacgatcgagaagcgcaacgtgcccggcctgctggagatcgcg
aagaagctcaacgcgccgctgctcgccacgaacgacgcgcactatgtgctggaatccggc
gccgaggcgcaggacgccatgctgtgcatcaactccggctccagactcgacgagccggga
cgcttcaaattcgacggctccggctactacatcaagtcggcccaggagatgcgcgagctg
ttcaaggaattccccggcgcttgcgacaacacgctggccatcgccgaacgctgcaacgtg
atcttcggcgacaacgaggacggcgcgttcatgccgcagttcccctgccccgaaggctgg
gacgagaccagcctgttcctgaagcaggtggaggaggggcttgagcgccgctacgacggc
aacgtgccgatcgacgtgctgcagcaggcggattacgaatgcggcgtgatctgccagatg
cagttctgcggatacttcctcgtggtggccgattacatccagtgggccaaggaccacggc
atcatggtggggcccggtcgtggctcggccgcaggatcgatggtcgcctacgcgatgggc
atcaccgagctcgacccgttgcagcatggtctgatcttcgagaggttcctcaaccccgag
cgagtctccctgcccgatatcgacgtggacttcgaccccgagggacgcatgcgcgtcatc
gaatactgcggcgagaagtacggccacgacaaggtggcccaatgcgtgatctacggcacc
atcaaaaccaagcaggcgctcaaggactccgcccgcatcatgggatacgagtattccatg
ggcgagcagatcaccaaggcgctgccgcccagcaaaaacggcaaggacgcgagtctgagc
gagatcttcgacccgacctccaagcgctacgcggaggcgcgcgagttccgcgagttctac
gattcgaatccggacgccaagcagatcaccgagaaggcgaagggcatcgaaggactgatc
cgccagaccggtgtgcacgcctgcgccaccatcatgggttcggcgcccatcaccgacacc
tcgccgctgttggaacgcgtcgacggcaccgtcaccaccaccttcgaataccacacctgc
gaaacgctgggtctggtgaagatggacttcctcgggctttccaacttgacggtgatccac
gacacgctgaagaacatcgaggcgaacggcaagccggcgatcgactacacgaagatcccg
ctggacgacaaggagacctaccagctgctgtcgcgcggcgacacccttggcgtgttccag
ctcgattccgacggcatgcgcgcgctgctgcgcaccttgcgccccgacaacttcaacgac
atctccgctctgatcgcgctctaccggccgggcccgatggatatggattcgcacaacaac
tatgcgaagcgcaagaacggcctgcagaagatcgaaccgatccatcccgaactcgaggaa
ccgttgaaggagatcctcgacgagacctacggtctgatcgtctatcaggagcaggtgcag
gccgccgcgcgaaaactcgccggctattcgctgggcaaggccgacgtgctgcgacgagcc
atgggcaagaagaagcccgaggttctggccaaggagaagatcccgttcttcgagggcatg
aaggagcatggctattcggaggaatccgcgcaggccgtgtgggacgtgctcgtgccgttc
tccggatacgcgttcaacaaggcgcattccgccgcctacggactgatctcctattggacc
gcctaccttaaaacccattatccggtggagttcatggcggccctgctgcaaggcaccaaa
gacaacaaggacaaaaccgccctctatctgggcgaggcgcgtcgcatgggcatccaggtg
ctctctccggacgtgaacgaatccgtgtacgagtattccgcagtcggcgacgtggtgcgc
ttcggcttaggcgccatccgcaacgtgggagacaaagccgtggccgacatcatcgccgaa
cgcagcggcgaacggggcaagttcgtgaatttcatggactatatccgccgcgtgccgctc
accgcgatcaaccgacggttggtggaatcgctgatcaaggcgggcgccttcgattcgatc
gaccccaaccgccgcgcgctgttcaccgtgcatgagaccgccatcgaatcggtgatggga
ttgaagcgcaaagaggccgaaggacagttcgacctgttcgccgacatggacgacggcggc
ggagaggatatgggcgacgcgtcggtgagcgtgcccgacttggaggagtgggataagagc
accaagctcaacttcgaacgcgagatgcttggcctgtacgtctccgaccatccgctttcc
ggcatgcagtccgtgctggccagcctgcgcgaggtgtccatcgcgcagctgatcgaccgt
gcgaaaaccatgggggcggggcagcaggtgaccctcgccggactggtcaccggcgtggac
cggcgcgtctccaaaaaaggcaatgcgtgggccatcgtcaccatcgaggatttggaaagc
tccatccaatgcatgttcttcggcaaggtgtacgagtcgaacgccgcggatctggtgctc
gacaaggtggtgcagatccgcgggcaggtggaattgcgcgacgagacggtgagcatgcgc
gccaccgaaatgcaggtgcccactctggaagccgaggacgagcgtccgctggtgctcacc
ctgccggtgggcgcgctcgaccgcaaccatatgatgcagttggggcaggtgctcaccagc
catcctggctactgcgaggtcaaactggcggtattggacgacaaaggcaacgccaaggtg
ctcaccttcggcgaccggttccgcgtcaaacgcgacacctcgctgttcgccgaaatcaaa
atcctattcggaccaagctgtctgccggccgcgtag
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