Bifidobacterium lemurum: BL8807_05735
Help
Entry
BL8807_05735 CDS
T06861
Name
(GenBank) isopeptide-forming domain-containing fimbrial protein
Organism
blem
Bifidobacterium lemurum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
RCC1_2
RCC1
GramPos_pilinBB
SpaA
CarboxypepD_reg
NOMO_3rd
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
QOL33334
LinkDB
All DBs
Position
1544740..1551852
Genome browser
AA seq
2370 aa
AA seq
DB search
MVRNIIGDGARALVAIALAAMTVLTVLAAMACVMPVMAQEPAAAEPYASVSIEKLADGTG
HGTAAQTFINSSNGFLPGDESADDGVVASADTVAYLLRLRFTAAGQRDVRVEWDLPEQLS
ALDIGCYAGRIVTATADGESACLYHVPAGAVESLERVVTLTARDTGGVAVDGVRPTVSFS
RQGGRGYTVRPEALTIVSAPRADLVVDNGGLGDAGDKTERVSAWTQSGQVSGWFDLRIRH
LTYPGHTTTHGASGAGEWSATVDVSAFPASTTWTVGGTPVAASNGRLRIERAKGEQRLEW
SIPAVDPTIRGMAEGGVIDLDIHVAPDKGGFQARGETALANNGDGGQPGDGMARDESTRD
ERTGAIAGYPYANNDYSRAIIERPARWQSEGDHMFGRYDPLAPAIPSGSTRFDREGREFA
ASGATRAVGDQGVARDTQVLHRLVLWPGNMPDCERNCDARLSYQWDRAQERYNGDLRVLL
DGQPLDSRLWWVEWSADILPDASGDDGVWHTGTPDATARAIRLRLRDDIGYGGASDGGTL
EMRFVSRAIADPARGNVRVEGETRMRMGDRLTSKPLASGYWVVAPGNPEATLKADAQATS
SDGLKADPLDLRPSDVVTYTITPHIANIADSSTPLTATVTAGLPEGLTTVENLTPQWTMR
RDGRTLTFTLAGHTPPYDADGDASLPAIRWSATVSNLAQGTLASACGMRALAAGAAAVSN
TASTQVAVSRADMHAARVTALDERVEAGDKLRWRFNIVDRGVAREGTVTTVLRLPSNQDS
AMTGANNTGLDGTWKEYTLGSSAFHGRPALAGPVELDGENTSEGTSVAYATDGRYSDDPR
YYQWRAWDDLSQSERARITAIRIISPFTRTSTRMACAQGVVTLTADGSQTDDLYHLWIGR
SRFSAGAITATMPWPDRIRVSDASIAGRLWWDENGDGRVDAAESGIASVTVSLWRADGQG
AAVGTALATTRTAADGGYRFDRLRHGDYLVTVARDGEYGVPRQRDDYYGRAHTVRNTATW
NARFGTQATDVSDRIALGVGETLAHVNFGYDAPDPKITVDKTQTRLECPDDAAEACTVAW
DVIVDNVGDQSVDADGMLTDRTSDDVTALAATAGTIAHTPDSEVVFSSVHSGGTFAYAID
TQGHLWSWGRNDYGQLALGDTTDRHAPTMVPTDRTFATVETTTNGMLALDTQGRLWAAGQ
NQRNVLGDADSAANYAWNDKTGFSTLHAVMPERAWASVSVSDGLTLAIDSQGRLWSWGAL
SDGLGVGRAATSSVASSWIEATRLSLDQTFSTAQAGSSAAFAIDTQGRLWSWGDDCRFGS
QGSCGALGDGTTGGRTSPAKVMSNRTWRDVVVSGSVTNCTVLALDTSGKLWVWGQNAAQR
TLWNLGIDARSAATPTAIMTGRTWTAIAGGDVKAAIDAQGHIWMWGSNAHGVYGDGTTSA
SVTPRLVRDDRAHIAISNGMATLALDVDGRIRSTGVGKRGALGLGPNVTAVTVPTLVDMR
EAGELSDSTAVPVTPVSVGQTGDLVERVYRLPAAIAPGERMVFHFSGSVTRSEQRRPIVN
QAWFDSPDTPYAGVPHARSAGVDEPEPPDAVRLNAATHDVVGNATCRSGGDYASAGLEHS
FAAGNEDSCDQVGAMVPAGSTAPVPGSIGGLAWLDGNANGLRDAGERMLGGAVTVSLWSL
DASGGETKIDETVTDENGRYVFDRLAMGDYRIWFALGDARYGFTAPGQGNGVNDSDASDR
AVDYGGTGVLTLRAASSSHDHVDAGAVVTSPTIGLLPFAGGSAMAAPLLFLTLIGGLAVV
GARRNPITTIGKDTIMTRTSTIASLAAAAAIAILAVAGVAPGAFAADSAVDLASKESITI
SSTGALAGHSFTAANLAEYIAAQTDGTVLTGVDMSTNGKLTSAVASALDQIDTDSAKAGV
QKPAYDAKNPMKWVSTNLRENATPQWSGQLRELAGLLARDATVTAAATSKATVNGATATF
SGLTPGVYLILDSTAAGTPASLPMIVSTKAGGKSFATMTLGTARIKLSAVAPPVKKILES
DGNSTKTVDATHAAIGESITYRITQQVPNWTGYDGYRLHVVDSLGEGLTYGELVGIKVNG
KALQSDQFLEKLSGRTATWTMGGAGDDILATQALRTVFAPGASIQIDYRASINAQGVIAG
AGNPNSVKLSHTADQRDKGVMREVPGNTVTAYTGAFSLNKIDGQGAAIDASLGARFHIYK
VENGTRSGNALKFSNTGSGAYTLAADQQGSGLVSDIPAGKATLNGMDGEYEVVEASAPQG
YLSAFKPTFRVSVTTGAKGVTLTMTKRDGDGLASIDSVNTRQVNVVNLTSMTQLPMTGST
MLTIMSVVAVLLITGGGALTLCMSRKVGGR
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atggtacggaacataatcggcgatggtgccagagcgctggtcgcgatcgcgctggccgcc
atgaccgtgctgaccgtgttggccgccatggcgtgcgtgatgccggtcatggctcaggaa
ccggccgcggcggaaccctatgcgagcgtctccatcgaaaagctggcggacggcacgggc
cacggcacggccgcgcagaccttcatcaactcgtccaacggattcctcccgggcgacgag
tccgccgacgacggcgtggtcgcctccgcggacaccgtcgcctatctgctgcggctgcgg
ttcaccgcggcggggcagcgggacgtccgcgtggagtgggatctgccggaacaactgtcc
gccctggacatcggctgctatgcgggccgcatcgtcacggcgacggcagacggcgaatcg
gcgtgcctgtaccatgtgccggccggcgccgtcgaatccctggaacgagtcgtcaccttg
accgcgcgggacaccggtggcgtggcggtcgacggtgtgcggccgaccgtctccttctcc
cggcagggagggcgcggctataccgttcggccggaagcgttgaccatcgtcagcgcgccc
cgcgccgacctggtggtcgacaacggcggtctcggcgacgcgggcgacaaaacggaacgt
gtcagcgcatggacgcaatccggccaggtgagcggatggttcgacctgcgcatccgccat
ctgacctacccggggcatacgaccacccatggcgccagcggcgcgggcgaatggagcgcc
accgtcgacgtctccgcgttccccgcctccaccacatggacggtgggcggaacgccggtc
gcggcctcgaacggccggctgcgtatcgaacgcgcgaaaggcgaacagcgcctcgaatgg
tcgattcccgccgtcgatccgacgatccgaggcatggccgaaggcggcgtcatcgacctg
gacatccacgtcgcgcccgacaagggcggtttccaagcgcggggagagacggccctggcc
aacaacggcgacggcggacagccgggcgacggcatggcgcgcgacgaatccacccgagac
gagcgcaccggggcgatcgccggctatccgtacgccaacaacgactacagccgcgcgatc
atcgaacggcccgccagatggcaaagcgaaggcgaccatatgttcggccgatacgatccg
ctggcaccggcgattccctccggatcgacgcgattcgaccgcgaagggcgcgaattcgcc
gcatccggtgccacgcgcgccgtcggcgatcaaggcgtggcgcgcgacacgcaagtgctg
catcgtctggtgctctggcccggcaatatgccggattgcgagcgaaactgcgatgcgcgg
ctctcctaccagtgggaccgcgcgcaggaacgctacaacggcgacctgcgggtgctgctc
gacgggcagccgttggacagtcgcctgtggtgggtggaatggagcgcggacatacttccc
gacgcgtccggcgatgacggcgtatggcatacgggaaccccggacgccacggcccgggcc
atacggctgcgcctgcgcgacgacatcggatacggcggcgcgtcggacggcggcacgctg
gagatgcgtttcgtcagccgcgccatcgccgatccggcccgcggcaacgtgcgggtggaa
ggcgagacgcggatgcgcatgggcgaccggctcaccagcaaacccctcgcctccggctat
tgggtggtggcgccggggaatccggaagcgacgttgaaggcggacgcgcaagccacgtcc
agcgacggattgaaggccgacccgctcgatctgcgcccatcggatgtcgtcacctacacc
atcacgccgcatatcgccaatatcgccgactcgtccaccccgctcaccgccaccgtgacg
gccggcctgcccgaagggctgaccactgtggagaatctcacgccccaatggacgatgcgc
cgcgacggacgcacgttgaccttcaccctcgccgggcatacgccaccgtatgacgcggac
ggcgacgcctccctgcccgccatccgatggagcgccaccgtctccaacctcgcgcagggc
acgctcgcctcggcctgcggcatgcgggcgctcgccgcaggcgccgccgccgtctcgaac
accgccagcacgcaggtggccgtcagccgggcggatatgcacgccgcgcgcgtgacggcg
ctcgacgaacgcgtggaggcgggggacaagctgcgttggcgtttcaacatcgtcgaccgc
ggcgtcgcacgcgagggaacggtcaccacggtgctgcgcctgccctccaatcaggactcc
gccatgaccggcgcgaacaacaccggcctcgacggcacatggaaggaatacactctcgga
tcgtcggccttccacggccgtcccgccctcgccggacccgtggaattggatggggagaac
accagcgaaggcacctccgtggcctatgcgaccgacgggagatactccgacgatccccgc
tactaccagtggcgcgcgtgggacgacctctcccaaagcgaacgggctcgcatcaccgcc
atccgcatcatctcaccgttcacccgcacctccacgcgcatggcctgcgcgcagggagtg
gtcaccctgaccgcggacggcagccagaccgacgacctctaccatctatggatcggccgc
agccgtttcagcgccggcgccataaccgccaccatgccctggcccgaccgcatccgcgta
tccgacgcctccatcgcagggcgtctgtggtgggacgagaacggcgacgggcgtgtggac
gccgcggaatccggcatcgcctccgtcaccgtcagcctatggcgggcggacgggcaagga
gcggccgtcggcaccgcgctcgccaccacacgcaccgcggcggatggcggctaccgtttc
gatcggctacggcacggcgactacctcgtcaccgtcgcccgcgacggcgaatacggcgtg
ccccgccagcgcgacgactactacgggcgggcgcacacggtgcgcaacaccgccacatgg
aacgcgcgcttcggcacccaggcaacggacgtcagcgaccgcatcgcgctgggcgtcggc
gagacgctcgcgcatgtgaacttcggatacgacgcgccggatcccaaaatcaccgtcgac
aaaacccagaccagactcgaatgccccgacgacgcggccgaggcgtgcacggtcgcctgg
gatgtgatcgtcgacaatgtgggagaccagagcgtcgacgccgacggcatgctgacggac
cgcaccagcgacgacgtcaccgcgctcgccgccacggccggcaccatcgcccacacgccc
gacagcgaggtcgtgttctcctccgtgcattccggcggcaccttcgcctacgccatcgac
acgcaaggccacctgtggagctggggccgcaacgactacgggcagttggcgcttggcgac
accacggaccggcacgcgcccaccatggtgcctaccgaccgcacgttcgcgacggtcgaa
acgaccaccaacggcatgctcgcccttgacacgcaagggcgtctgtgggcggccgggcag
aaccagcgcaatgtgctgggcgacgccgacagcgccgccaactacgcctggaacgacaaa
accggcttctccaccctgcatgcggtgatgccggagcgcgcatgggcgagcgtgagcgtg
tccgacggactgaccctcgccatcgactcccaagggcgtctgtggagctggggcgcgctc
agcgacggcctcggcgtgggacgcgccgccacctcatccgtggcgtcctcatggatcgaa
gccacccgcctgtccctcgaccagaccttctccacggcgcaggccggcagcagcgcggcg
ttcgccatcgacacgcaagggcgtctgtggagctggggagacgactgccggttcggatcg
caaggcagctgcggcgcgttgggcgacggcaccaccggcgggcgcacctccccggccaaa
gtgatgtccaaccgcacgtggcgcgacgtggtcgtctccggcagcgtcaccaattgcacc
gtgctcgccttggacacctccggcaagctttgggtctgggggcaaaacgcggcgcaacgg
acattatggaacctcggcatcgacgcgcggtccgcggccacccccaccgccatcatgacg
gggcggacatggaccgccatcgccggaggcgacgtgaaagccgccatcgacgcgcaagga
cacatctggatgtggggatcgaacgcccacggcgtctacggcgacggaaccaccagcgcc
agcgtcacgccccgactggtgcgagacgaccgcgcgcatatcgcgatatcgaacggcatg
gccacccttgctctggacgtggatggccgcatcagaagcaccggcgtgggcaaacgcggc
gctttaggcctcggtccaaacgtcaccgccgtgaccgtccccacgttggtcgatatgcgc
gaagccggcgaactgtcggattccaccgccgttccggtcacgcccgtcagcgtggggcag
acgggcgacctcgttgaacgcgtctatcgtctgccggccgccatcgcgcccggcgaacgg
atggtgttccatttcagcggctcggtgacgcgctccgaacaacgtcggcccatcgtcaac
caagcgtggttcgactccccggacacgccatacgcgggcgttccccatgcgcgttcggcg
ggcgtggacgaaccggaacctcccgacgccgtacggctgaacgccgccacccacgacgtc
gtgggcaatgccacatgccgcagcggcggcgactacgcgtcggccggacttgaacattcc
ttcgccgcgggcaacgaagactcctgcgaccaagtgggcgcgatggtccccgccggctcc
accgcgcccgtgcccgggtcgatcggcggcctcgcctggctggacggcaacgcgaacgga
ttgcgcgacgccggcgaacgcatgctcggcggggcggtgaccgtctccttgtggtcgttg
gacgcttccggcggcgaaaccaaaatcgacgaaaccgtcaccgatgagaacggacggtac
gtcttcgaccggctcgccatgggcgattaccgtatttggttcgctttgggagacgcgcga
tacggcttcaccgcaccaggccaaggcaatggcgtcaatgattccgatgccagcgaccgc
gccgtcgactatggcggcaccggcgtgctgacgttacgcgccgcctcctcatcccacgac
cacgtcgacgccggcgcggtcgtcaccagcccgaccatcggcctgctgcccttcgcgggc
ggcagcgccatggccgcgcccctcctgttcctcacgctgatcggcggccttgccgtcgta
ggcgcgaggcgcaaccccatcaccactatcggaaaggacaccatcatgacccgcacctcc
accatcgcctccctcgccgccgcggcggccatcgcgatactcgccgtcgcaggcgtcgcc
cccggcgctttcgccgccgattccgccgtggatctcgccagcaaggagagcatcaccatc
agctccaccggagctctcgccggacacagcttcaccgccgcgaacctggccgaatacatt
gccgcccaaaccgacggcaccgtgctcaccggcgtggatatgagcaccaacggcaaactc
acatcggccgtcgcctccgcgctggatcagatcgacaccgactccgccaaagccggtgtg
cagaaacccgcctatgatgcgaagaatcccatgaaatgggtgtcgacgaatctgcgcgag
aacgcgacgccgcaatggtccggccagctgcgcgaattggccggtctgctcgcgcgggac
gccacggtcacggccgccgcgacgagcaaggcgacggtaaacggcgccacggccacattc
tcgggtctcactcccggcgtgtatctgatcctcgactccaccgccgcgggcacgcctgcg
tccctgccgatgatcgtaagcaccaaggccggcgggaaaagcttcgcgacgatgacgttg
ggcacggcgcggatcaagctctccgccgtcgcgccgccggtgaagaagattctggaatcc
gacggaaactccaccaaaaccgtggacgcgacgcatgccgccatcggcgaatccatcacc
taccgcatcacccagcaggtgccgaattggaccggctatgacggctatcggctgcatgtg
gtggacagcttgggcgaggggctgacctatggagaactggtcggcatcaaggtgaacggc
aaggcgctgcagtccgaccagttcctggagaagctttcgggacggaccgccacatggacg
atgggcggtgcgggcgacgatatcctcgccacgcaggcgctgcgcacggtgttcgcgccg
ggagcgagcatccagatcgactaccgcgcgagcatcaatgcgcaaggcgtgatcgcgggc
gcgggcaatccgaacagcgtcaaactcagccataccgccgaccaacgcgacaagggcgtg
atgcgcgaggtgccgggcaacaccgtcaccgcatacaccggggcgttcagtctgaacaaa
atcgatgggcagggcgccgccatcgacgcttcgttgggtgcccgattccacatatataag
gtggagaacggcacgcgttccggaaacgcgcttaagttctcgaacaccggttcgggcgca
tacacgttggcggccgaccagcagggctccggtctggtcagcgacattccggccggcaag
gccacgctgaacggtatggatggggaatacgaggtcgtcgaggcgagcgcgccgcaaggc
tatctctccgcgttcaagccgacgttccgggtgtcggtgaccaccggcgcgaaaggcgtc
accctgaccatgaccaagcgcgacggcgacggcctcgcctccatcgattccgtgaacacc
aggcaggtcaatgtcgtgaatctcacatcgatgacccagctgccgatgacgggcagcacc
atgctgaccatcatgtcggtcgtcgcggttctgctgatcacgggcggcggcgcgttgacc
ctctgcatgtcgcgcaaggtcggcggtcgatga
DBGET
integrated database retrieval system
