Bifidobacterium lemurum: BL8807_06430
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Entry
BL8807_06430 CDS
T06861
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
blem
Bifidobacterium lemurum
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blem03016
]
BL8807_06430
Enzymes [BR:
blem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BL8807_06430
Transfer RNA biogenesis [BR:
blem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BL8807_06430
Prokaryotic type
BL8807_06430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QOL33449
LinkDB
All DBs
Position
1695990..1696901
Genome browser
AA seq
303 aa
AA seq
DB search
MEAMTRLRIDLAYDGGGFYGWATQPALRTVQGTIESALHTVLRVPQDDPDQRLRLTVAGR
TDTGVHASHQVCHIDLDEALLERAVGHMNVSGVEALHRRLSRMLPDDITLHRVGRAPNGF
DARFSALERTYVYRIADRGSEVDPRLRGFVLRIDDRLDLDAMNEAAAMTIGLHDFGSFAT
PNPGGTTIREVKYARWERVPVRPLIDKTGLAYETPAVESGLACLTIVADAFARNMVRSLV
NGCVQVGLGKRDLDWFAGKMAVPLREGSTGPIAPQGLTLEHIAYPADDQLAARAEAIRAV
RTL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatgacacgacttcgcattgacttggcgtacgacggcggcggattctacggt
tgggcgacgcagccggcattgcgcaccgtgcagggcaccatcgagtcggcgttgcacacc
gtgctgcgcgtcccgcaagacgatcccgaccaacggctgcgtctgaccgtggcgggccgg
accgacaccggcgtgcacgccagccatcaggtgtgccatatcgatctcgacgaggcgctg
ctggagcgcgcggtcgggcatatgaacgtctccggcgtcgaggcgttgcatcgcaggctc
tcccgcatgctgcccgacgacatcaccctccaccgcgtcggccgcgctcccaacggcttc
gacgcgcgcttctccgcgctggaacgcacctacgtctatcgcatcgccgaccgggggagc
gaagtcgaccccagactgcgcggtttcgtgctgcggatcgacgaccggctcgatctggac
gccatgaacgaggccgcggcgatgaccatcggcctgcatgatttcggatccttcgccaca
ccgaatccgggcggcaccaccattcgcgaggtgaaatacgcgcgatgggagcgcgtgccc
gtccgtcctctgatcgacaagaccggtctggcctacgaaacccccgccgtggagtccggc
ctggcgtgcctcaccatcgtggccgacgccttcgcgcgcaatatggtgcgctccctggtc
aacggatgcgtgcaagtgggcctcggcaaacgcgacctcgattggttcgccggcaaaatg
gccgtgcccctgcgcgagggatccaccggccccatcgccccccagggcctgacgctggaa
catatcgcctatccggccgacgaccagctcgccgcccgcgccgaagccatccgtgccgtg
cgcacgctgtag
DBGET
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