Bifidobacterium lemurum: BL8807_06470
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Entry
BL8807_06470 CDS
T06861
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blem
Bifidobacterium lemurum
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blem03016
]
BL8807_06470 (truB)
Enzymes [BR:
blem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BL8807_06470 (truB)
Transfer RNA biogenesis [BR:
blem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BL8807_06470 (truB)
Prokaryotic type
BL8807_06470 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QOL33455
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All DBs
Position
1706951..1708024
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AA seq
357 aa
AA seq
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MATSDARTTAGGLLIIDKPQGVTSFDAVAAVRAALHTKKVGHAGTLDPMATGMLVIGFGN
ATRLLTAIVEHDKSYEATIRLGQRTTTDDAEGELIAPESGTTGVVDAASRVDRLTRELVE
GAIREYFTGDIEQVPNSFSAIKINGQRAYDLAREGKTVELKARPVTIGEFTVLDMRRTAA
DGGSDASMPVADVDVRVSCSSGTYIRALARDLGERLGVGGHLTRLRRTRVGRFDFADEAV
ARRAIGAHAESYSFTNREGETITRNKCMLDTSGLSGDQRREWLLHHALSMVEAVRGAMPV
VEVSVEEAAELRFGRRIVRRLEVDQAAAVVADTQDVVALVAPANGSQIKPVTVFAAA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagtgacgcccgcaccacggccggcggcctgctcatcatcgacaagccgcaa
ggcgtgaccagcttcgacgcggtcgccgccgtgcgcgccgccctgcataccaagaaagtc
ggccatgcgggcacgcttgatccgatggccaccggcatgctcgtcatcggattcggcaac
gccaccagactgctgactgcgatcgtcgaacacgacaaaagctatgaggccacgatccgc
ctcggacagcgcaccaccaccgacgacgccgaaggcgaactcatcgcgccggagagtggc
acgacgggagtggtcgacgcggcgagtcgagttgaccgactgacccgagagctggtcgag
ggggccatccgcgagtatttcaccggtgacatcgaacaggtgcccaacagtttctccgcc
atcaaaatcaatggccaacgcgcctacgatctggcccgcgaaggcaagacggtcgagctc
aaagcccgtcccgtcaccatcggcgaattcaccgtgctcgacatgcgtcgcaccgccgcc
gacggaggctccgacgcttcgatgcccgtggccgatgtggacgtgcgcgtgagctgctcg
tccggcacctatatccgcgcgttggcccgcgacctcggggaacggctcggcgtgggaggc
catctgacccgtttgcggcgcacccgcgtcgggcgtttcgatttcgccgacgaggccgtc
gcacggcgcgccatcggcgcgcatgccgaatcgtacagcttcaccaaccgtgagggcgaa
accatcacgcggaacaagtgcatgctcgacacgtccggactctccggtgaccaacgccgc
gaatggctgctgcatcacgcgctgagcatggtcgaggccgtgcgcggtgccatgccggtg
gtcgaggtcagcgtcgaagaagccgccgaactgcgtttcggccgtcgtatcgtccgccgt
ctcgaggtggaccaggccgccgcagtggtggccgacacccaggacgtggtcgcgttggtc
gccccggccaacggctcccagatcaaacccgtcaccgtattcgccgccgcctag
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