Bifidobacterium lemurum: BL8807_07060
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Entry
BL8807_07060 CDS
T06861
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blem
Bifidobacterium lemurum
Pathway
blem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BL8807_07060 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blem03019
]
BL8807_07060 (recQ)
03400 DNA repair and recombination proteins [BR:
blem03400
]
BL8807_07060 (recQ)
Enzymes [BR:
blem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL8807_07060 (recQ)
Messenger RNA biogenesis [BR:
blem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BL8807_07060 (recQ)
DNA repair and recombination proteins [BR:
blem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BL8807_07060 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
DEAD
Helicase_C
RQC
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QOL33558
LinkDB
All DBs
Position
1848700..1850682
Genome browser
AA seq
660 aa
AA seq
DB search
MTDNTAALGALKRYFGYDSFRPGQAGIVDTLLAGRDVLGVMPTGAGKSVCYQIPAVLMPG
ITVVISPLISLMRDQVDGLNDAGVPAAFVNGTQAPDEQGMVLAQAAAGQIKLLYVAPERL
ETTRFRDFAARVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFIAGLPARPVVGAFTATAT
ERVRRDVVGLLGLRNPAVTVTGFDRPNLYFDVLNMESKHKAAWVASYVAEHAEESGIIYC
ATRKDTEALAATLNQSVPQLREAKGAHTAAGPIAVAYHGGMLADERNRAQADFVADRVPV
VVATNAFGMGIDKSNVRYVIHHNMPESIEAYYQEAGRAGRDGEPSRCTLLWNESDIVTRR
RLLDGDYENERLSPEEQEIVRMAKRRLLDGMVGYCRTTDCLHRYMTRYFGQEGDDGSPCT
ACSNCGQTFETIDVTNIARAISQCVHDVDQRVGSGKIVKILRGSKAQDLAWLNPEAMPTF
GMLRDVNEARVRDVLSQMATDGFLFIAEGRMPIVRFGVRAGETIAADFHYEIKRVRRSSA
ATGGTAFGGGVGSKGGASRGSMVASVASTGVAAPSDEDEALFERLRALRREIAQEIGKPP
YIVFSDKTLRDMAAIRPLTNAQFLAVNGVGENKLNQYGKRFMEAVAAFQAEVAAPQAGRD
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaacacggcggcgcttggcgcgctgaaacgctatttcggatacgattcgttc
cgcccgggacaggcgggcatcgtggacacgctgctcgccggccgggacgtgttgggcgtg
atgcccaccggtgcgggcaaatccgtgtgctatcagattcccgccgtgctgatgcctggc
atcaccgtcgtgatctcgccgttgatttcgctgatgcgcgaccaagtcgacggtctgaac
gacgccggcgttcccgcggccttcgtcaatggcacgcaggctcccgacgagcagggcatg
gtgctcgcgcaggccgccgccggccagatcaaactgctgtatgtcgcgccggaacgtttg
gagaccacgcggttccgcgacttcgccgcgcgcgtgcccatctctctggtcgccgtcgac
gaggctcattgcgtttcgcaatggggccaggatttccgctcatcctatctgggtatcggt
gaattcatcgcgggtctgcccgcgcgtccggtcgtcggcgcgttcaccgccaccgccacc
gaacgcgtgcgccgcgacgtcgtgggcctgctgggattgaggaatccggcggtgaccgtg
accggcttcgaccggccgaatctgtatttcgacgtgctcaacatggagtccaaacacaag
gccgcatgggtggcgagctatgtggccgagcatgcggaggaatccggcatcatctactgc
gccacccgcaaggacaccgaggcgctcgccgccacgctcaaccaaagcgtgccgcagctg
cgggaggccaaaggcgcgcacacggccgcgggccctatcgccgtggcctaccacggcggc
atgttggccgacgagcgcaatcgggcgcaggccgacttcgtcgccgatcgtgtgcccgtg
gtcgtggccaccaacgccttcggcatgggcatcgacaaatcgaacgtgcgctacgtgatc
caccacaatatgcccgaaagcatcgaggcctattatcaggaggccggccgtgcggggcgg
gacggcgaacccagccgatgcacgctgctgtggaacgaatcagacatcgtcacaagacgg
cggttgcttgacggcgactatgagaacgagcggctcagccctgaagagcaggagatcgtg
cgtatggccaaacgccgtctgctcgacggcatggtcggatactgccgcaccaccgactgc
ctgcatcggtatatgacgcggtatttcggacaagagggggatgatggctcgccttgcacc
gcctgctcgaattgcgggcagaccttcgagaccatcgatgtgacgaacatcgcgcgggcg
atcagccaatgcgtgcacgacgtggaccaacgggtcggctccggtaagatcgtcaaaatc
ctgcgcggttccaaagcgcaggatctcgcctggctcaatcccgaggccatgcccactttc
ggcatgcttagggatgtgaacgaggcgcgcgtgcgtgatgtgctcagccagatggccacc
gacggcttcctgttcatcgcggaaggccgcatgccgatcgtgcggttcggcgttcgggcc
ggcgagaccatcgctgcggatttccactacgagatcaagagggtgcggcgttcgtccgcc
gccaccggtggaacggccttcggcgggggtgtcgggtccaagggcggcgcgagccgtggt
tcgatggtcgcgtccgtcgcttcgacgggtgtcgccgcgcccagcgacgaggatgaggcg
ctgttcgaacgattgcgcgcgctgcgccgcgagatcgcgcaggagatcggcaagccgccc
tacatcgtgttctccgacaagacattgcgcgatatggccgccatccgtcctctcaccaac
gcgcagttccttgcggtgaacggcgtgggcgagaacaagctcaaccagtacggcaagcgt
ttcatggaggccgtggccgcgtttcaagccgaggtcgccgcgcctcaggcaggtcgggat
tag
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