Bifidobacterium lemurum: BL8807_08175
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Entry
BL8807_08175 CDS
T06861
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
blem
Bifidobacterium lemurum
Pathway
blem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL8807_08175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blem03400
]
BL8807_08175
DNA repair and recombination proteins [BR:
blem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL8807_08175
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BL8807_08175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
Anti-TRAP
AAA_16
ATPase
AAA_25
AAA_33
BCA_ABC_TP_C
DUF463
DUF7129
HUTI_composite_bact
MobB
RNase_E_G_Thio
Zn_ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
QOL33755
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All DBs
Position
2131632..2134358
Genome browser
AA seq
908 aa
AA seq
DB search
MTDGRRIGGADHIEIRGARVNNLKHVDVDIPLNRLVAVAGVSGSGKSSLALDVLYAEGSR
RYLDALSTYTRRRMTQAQRPQIDEARYLPPALALRQRPGVGGVRSTFGTMTELLNVLRLM
FSRLAHHRCPNGHYHAPTIAVAAETPFFCDECGARIDAPGAEMLAFNSTGACPRCQGTGL
VRDVDDATLVPDDSLTIDEGAVLPWKMFGWRVQNDIAREFGVRTDVPFRDLTDKERDIVF
NGPEEKKHIVVTSMKGVHELDFTFRNARLTVTKELERAADEKRLARVMRFVTEHTCPDCD
GTRLSEAARWPLIDGINLAQATAMTLDGALVWVRGVPAGLPDEMRPMAQALADTFEEMGQ
RLVQLGLGYLGLDRSGESLSTGERQRAQLARAVRNETTGVLYVLDEPSTGLHPANMEGLV
GVMRDLLGDGNSVVFVDHDVNVLRAADYFIEMGPGAGVEGGRVIAQGSPDEIIADPNSRI
AGFLAGREPALVRERQTASAAAVGTDENASFDDAAVRSKRKSGKGGKEAADHGGDTRWLR
MRTEAIHTVRPLDVAIPVGRLTAVTGVSGSGKTTMVLESLVPALQAAAEGRALPKHVSAI
DAAGIDTVRIVDSTPIGVNVRSTLATYSGIMDLLRRAFAATDEAQARGLALADFSYNTGS
LRCPQCDGAGRVNLDVQFLPDVTIACPACEGTRYRDEVNGIRLAVGERRMTLPQILAMSV
DALLDVFEGRASRTADSAQEAAAGSRRNATAPADKTNAHDAAGAAPADATRKRIAKALRT
LHDLGLGYLTLGEDTPSLSGGEAQRLKLSNELGKRQRTSLFVLDEPTVGLHPLDVRTLIG
VLQRLLDGGATIVVIEHDLDLIANADHVIDMGPGGGEQGGRIVATGSPERIAAASESVTG
RYLRALLG
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggacgacgaatcggcggcgcggatcacatcgaaatccgcggcgcacgcgtg
aacaatctcaaacacgtggatgtggacatcccactcaaccgattggtcgccgtggcgggc
gtctccggctccggcaaatcctcactcgctttggacgtgctttacgcggaaggctcgcgc
cgctacctcgacgcgctgtcgacctacacgcgccggcgcatgacgcaggcgcaacgcccg
cagattgacgaagcccgctacctgccgcccgcgctggccttgcggcagcggccgggcgtg
ggcggcgtgcgctccactttcggcacgatgaccgaactgctcaacgtgctgcgcctcatg
ttctcccgactggcccaccaccgttgccccaatgggcactatcacgctccgaccatcgct
gtggccgccgaaaccccgttcttctgcgacgaatgcggcgcgcgcatcgacgcgccggga
gcggagatgctcgccttcaactccaccggcgcatgcccgcgctgtcaaggcaccggcctg
gtgcgcgacgtggacgatgcgaccttggtgccggacgattcgctcaccatcgacgagggc
gcggtgctgccgtggaagatgttcggctggcgcgtgcagaacgacatcgcccgcgaattc
ggcgtgcgcaccgacgtgccgttccgagacctgacggacaaggaacgcgacatcgtcttc
aacgggccggaggagaagaagcatatcgtcgtcacgtcgatgaaaggcgtgcacgaactc
gacttcaccttccgcaacgcgcgcctgaccgtcaccaaggagctggaacgcgccgccgac
gaaaagcgcctcgcccgcgtgatgcgcttcgtcaccgaacacacctgccccgactgcgac
ggcacgcggctgagcgaggccgcccgatggccgctgatcgacggcatcaacctcgcccaa
gccaccgccatgaccttggatggcgcgctggtgtgggtgcgcggcgtgccggccggactg
ccggacgagatgcggccgatggcccaagccttggccgacaccttcgaggagatgggccaa
cgactggtgcagctcggcctcggatatttgggcttggatcgatccggcgaatccctctcc
accggcgaacgccagcgcgcgcagctcgcccgcgccgtgcgcaacgagaccaccggcgtg
ctctacgtgctcgacgaaccctccaccggcctgcatccggcgaatatggaaggattggtc
ggcgtgatgcgcgacctgctgggcgacggcaactcggtcgtgttcgtcgaccacgacgtg
aacgtgctgcgcgccgccgattatttcatcgaaatgggacccggcgcgggcgtggaaggc
gggcgcgtcatcgcccaaggctcgccggatgagatcatcgccgacccgaactcgcgcatc
gcgggattcctcgccgggcgcgaacctgcgctcgtgcgcgagcggcagacggcatcggcg
gctgcggtcggcacggatgagaatgcctctttcgacgatgcggccgtccgttccaaacgc
aagtccggcaagggcggcaaggaagcggcggatcatggcggcgatacgcgttggctgcgc
atgcgcaccgaagccatccacaccgtgcggccgttggacgtggcgattccggtcgggcgt
ctcaccgccgtcaccggcgtctccggatcgggcaaaaccacgatggtgctcgaatccttg
gtgcccgccttgcaggccgcggccgaggggcgtgcgctgccgaagcatgtgagtgcgatc
gacgcggccggcatcgacacggtgcgtatcgtggactccacacccatcggcgtcaacgtg
cgctccaccctcgccacctacagcggcatcatggacctgctgcgccgcgcgttcgccgcc
accgacgaggcgcaggcccgtggacttgcgctcgccgacttctcctacaacaccggctcg
ctgcgctgcccgcaatgcgacggcgcgggccgcgtcaacctagacgtgcagttcctgccg
gatgtgacgatcgcctgccccgcctgcgaaggcacgcgctaccgcgacgaggtgaacggc
atacggcttgcggtgggggagcggcgcatgacgctgccgcagatcctcgccatgagcgtc
gacgcgctgctggacgtttttgagggccgcgcgtcacggacggcggattcggcacaagag
gccgccgcaggctcgcgaaggaacgcgaccgcgcctgccgacaagacgaacgcgcatgac
gccgccggagcggcgcccgccgacgcgacgcgcaaacgcatcgccaaagcgttgcgcacc
ctgcacgatctgggactcggctatctcacgctcggcgaggacacgccctcattgtccggc
ggcgaggcgcagcggctcaaactctccaacgaactcggcaagcggcagcgcacttcgctg
ttcgtgctcgacgaacccacggtcggcctgcacccgttggacgtgcgcacgctgatcggc
gtgctgcagcggctgctcgacggcggcgccaccatcgtggtcatcgaacacgacctcgac
ctgatcgccaacgccgaccacgtcatcgacatggggccgggcggcggcgaacaaggcggc
cgcatcgtcgccaccggttcgcccgagcggatcgccgccgcatccgaatcggtcacgggc
cgctatctgcgggcgctgttgggctga
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