Bifidobacterium lemurum: BL8807_09800
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Entry
BL8807_09800 CDS
T06861
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
blem
Bifidobacterium lemurum
Pathway
blem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL8807_09800 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blem03400
]
BL8807_09800 (uvrA)
DNA repair and recombination proteins [BR:
blem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL8807_09800 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BL8807_09800 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
AAA_23
AAA_33
DnaJ_CXXCXGXG
nSTAND3
AAA_22
APS_kinase
NACHT
cobW
T2SSE
Viral_helicase1
Mtrc-MtrF_II-IV_dom
Cytochrom_c3_2
Frankia_peptide
Cytochrome_C7
FtsK_SpoIIIE
Septin
Motif
Other DBs
NCBI-ProteinID:
QOL34027
LinkDB
All DBs
Position
complement(2468142..2471174)
Genome browser
AA seq
1010 aa
AA seq
DB search
MAAQTTTHAGASGDTRTISNTDSTATAERVLDSDSFLAKELAKAPLTETNDGRSLVADIS
HIPNDLKVVIQGAREHNLKNVDLAVPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVES
LSAYARQFLGQMDKPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEVYDYLRLLFARTG
VPHCPECGGLVTAQTPQQIVDALLAKPERTRFQILAPVAKGRKGEFVELLEVLRSDGYAR
ALIDGEMRQLSDEIKLAKQKKHTIEVVIDRLVVKDGIRQRLTDSIETALRLANGVVVADF
VDEAEDSSERRQPFSEHRSCPNGHQLELDEIEPRTFSFNAPYGACPVCTGLGFKLEIDPE
LIIADPEKSLADGVIEPWSSTKTTSQYYSHVLEGLADEMGFSMRTPWKDLPEEARQAVLY
GRDFKVKVSYRNRWGRLREYSTGFEGVVRTLMRRHDETDSDAMKQYYESYMREVPCQECQ
GRRLKPEVLAVTVNDKSIFDVCDMPVVRELEWVNGLRLEGAAAQIAGEVLKEIKARLGFL
NDVGLDYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLIET
LHHLRDLGNTLIVVEHDEETIKEADWLVDIGPGAGEHGGEVIYSGPAAHLTDATRSITGD
YIAGRREIAVPEHRRKVRKTKTLKVVGARENNLKNLTVSFPLGVMTVVTGVSGSGKSTLV
NSILYPVLADKLNGARIVPGKHTRVEGVDQVRKVIHVDQNPIGRTPRSNPATYTGVWDKI
RTLFAKTPEAQVRGYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVECETCHGKRY
NRETLEVKYNGKTVSDILDMPIEEAAGFFKAYPSIARYLDTLVDVGLGYIRLGQPAPTLS
GGESQRVKLATELQKRSDGKTVYILDEPTTGLHFEDVRKLLKVLDGLTDKGNTVIVIEHN
LDVIKTADWLIDLGPEGGDGGGTIVTEGTPEQVADCADSWTGRFLKPMLG
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
gtggcagctcagacgacaacgcacgcgggtgcgagcggcgatacccgaaccatcagcaac
acggattcgacggcgacggcggagcgcgtgctcgacagcgactccttcctcgccaaggaa
ctcgccaaagcgcccctgaccgaaacgaacgacgggcgctcgctggtcgccgatatctcg
catattcccaacgatctcaaggtcgtgatccaaggcgcccgcgagcacaatctcaagaac
gtggaccttgcggtgccgcgcaaccgtatggtcgtgttcaccggcctgtccggctcgggc
aagtcctcgctcgcgttcgacaccctgttcgccgagggccagcgccgctatgtcgaatcg
ttgtccgcgtacgcccgccagttccttgggcagatggacaagccggatgtggatttcatc
gaaggtctgtcgccggccgtctccatcgaccagaagaccacgaatcgcaatccgcgttcg
accgtcggcaccatcaccgaggtgtacgactatctgcgtctgctgttcgcgcgcacgggc
gtgccgcattgccccgaatgcggcggactcgtcaccgcgcagaccccgcagcagatcgtc
gacgccctgctcgccaaaccggagcgcacgcggttccagatcctcgcgccggtggcgaag
ggccgcaagggcgagttcgtggagctgcttgaggtgctgcgatccgacggctacgcccgc
gcgctcatcgacggcgagatgcgccagctgtccgacgagatcaagctcgccaagcagaag
aagcacaccatcgaagtggtaatcgaccgactggtcgtcaaggacggcatccgccagcgt
ctgaccgattcgatcgagacggcgctgcgcttggcaaacggcgtggtcgtggccgatttc
gtggacgaggcggaggattcgtccgaacgccgccagccgttctccgaacaccgcagctgc
cccaacgggcaccagctggaactcgacgagatcgagccgcgcaccttctccttcaacgcg
ccctacggcgcatgcccggtatgcaccggtctgggattcaagctggagatcgacccggag
ctcatcatcgccgatccggagaaatccttggccgacggcgtgatcgagccgtggtcgagc
acgaaaaccacctcgcagtactacagccacgtgctcgaaggcctcgccgacgagatgggc
ttctcgatgcgcacgccctggaaggacctgcccgaggaggcgcggcaagcggtgctctac
ggacgcgacttcaaggtgaaggtctcctaccgcaaccggtgggggcgtctgcgtgagtat
tccacaggcttcgagggcgtggtgcgcacgctgatgcgccggcacgacgaaaccgactcc
gacgcgatgaagcagtactacgagtcgtatatgcgcgaggttccgtgccaggaatgccaa
ggccggaggctgaagcccgaagtgctggccgtcacggtgaacgacaagtcgattttcgac
gtgtgcgacatgcccgtggtgcgcgagctggaatgggtgaacgggctcaggctcgaaggc
gccgccgcgcagatcgctggggaggttctgaaggagatcaaagcgcggttgggcttcctc
aacgacgtgggcctcgactatctgaccctgtcgcgcgcggccgccacgctgtcgggaggc
gaggcgcagcgcatccgactggccacgcagatcggctccggcctggtcggcgtgatgtac
gtgctcgacgagccgtccatcggcctgcaccagcgcgacaacgaacgtctgatcgaaaca
ctgcaccatctgcgcgacctcggcaacacgctgatcgtcgtcgagcacgacgaggagacc
atcaaggaggccgactggctggtggatatcggccccggcgcgggcgagcacggcggcgag
gtcatctactccggtccggccgcgcatctgaccgacgcgacgcgttcgatcaccggcgac
tacatcgccggccgccgtgagatcgccgtgcccgaacaccgccgcaaggtgcgcaaaacc
aaaacgctgaaagtggtgggggcgcgggagaacaatctgaagaacctcaccgtgagcttc
ccgctcggcgtgatgaccgtggtcaccggcgtctccggttcgggcaagtccacgctggtg
aattcgatcctctacccggtgctggcggacaagctcaacggcgcgcgcatcgtgccgggc
aagcacacgcgcgtcgaaggcgtcgaccaggtgcgcaaggtgattcacgtcgatcagaat
ccgatcggccgcacgccgcgttccaaccccgccacctacacgggcgtgtgggacaagatc
cgcacgctgttcgccaaaacgcccgaggcgcaggtgcgcggctacgggccgggccgtttc
agtttcaacgtcaaaggcggacggtgcgaggcctgccatggcgacggcaccctgaaaatc
gaaatgaacttcctgccggacgtatatgtggaatgcgagacctgccacggcaaacgttac
aaccgcgagaccttggaggtcaaatacaacggcaaaaccgtctccgacatcctcgacatg
cccatcgaggaggcggcgggattcttcaaggcgtatccgtcgatcgcgcgctatctggac
actttggtggacgtcggcctcggctacatccgtctcggacagcccgcgcccacgctttcg
ggtggtgaatcgcagcgcgtcaagctcgccaccgaactgcagaagcgctccgacggcaaa
accgtgtacatcctcgacgagccgaccaccggcctgcatttcgaggatgtgaggaagctt
ttgaaggtgctggacggactgaccgacaagggcaatacggtgattgtgatcgaacacaac
ctcgacgtgatcaaaaccgccgattggctgatcgacctcggccccgagggcggcgacggc
ggcggcaccatcgtcaccgaaggcacgcccgaacaggtggccgactgcgccgactcctgg
acgggccgtttcctcaagcccatgctcggctga
DBGET
integrated database retrieval system
