Bifidobacterium lemurum: BL8807_10370
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Entry
BL8807_10370 CDS
T06861
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blem
Bifidobacterium lemurum
Pathway
blem03420
Nucleotide excision repair
blem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BL8807_10370
03430 Mismatch repair
BL8807_10370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blem03400
]
BL8807_10370
Enzymes [BR:
blem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL8807_10370
DNA repair and recombination proteins [BR:
blem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BL8807_10370
MMR (mismatch excision repair)
Other MMR factors
BL8807_10370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QOL34128
LinkDB
All DBs
Position
complement(2605450..2608185)
Genome browser
AA seq
911 aa
AA seq
DB search
MQQDPDVIARTAEELVGDLNPQQGEAVQYQGPALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAAEMRERLATLIGPVAQRMWVSTFHSACVRILRRDGQSIGLKSGF
SIYDSADSERLIKIIATEFNLDVKRYTPRSILGKISDLKNNLTGWQEYLAAHAPDFTPGQ
RGYQFGHAGDLEAIHAVLYAEYEHRLGLANAVDFDDLIGRTVELLRKDPQVADYYHHRFR
YILVDEYQDTNHAQYVLVRELAGVDARESADATPGGNGRFAGKTGPAWITVVGDSDQSIY
AFRGADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVITNNEGRKPKKLWTAMGK
GEPIVGYAADNAQQEAAWVAGEIARLHAEEGIAYSDMAIMYRANAQSRSLEEALINGGEP
YQLVGGTKFYERREVKDALAYLQALVNPDDDVNLRRILNVPKRGLGDRAEGILLNYAREH
GASFFYALMHVDEIQDMPTRTANQLRAFRDLMASLSQFTRAHDAKPSEVVAEVLDKSGLR
ADLEKSVDPQDASRLENLSQLQSTAAEFEQKTPDATLAGFLETTALVADSDQLPDEGEDS
GKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRAMEDISELSEERRLAYVGITRAKRRLY
VTRAAVRSQWGQASDMMPSQFLDEIPDELVDWKRREAGVERMRGAWGRDEFDDDFGGWDD
DFSSGTTFGGSGSSYGSSYGSGSRYGSSYGSGSSSYGSGSRYGGSSRSGSGSYGGSSYGS
GSSGRSYGSGSGSRSYGSSGSRYGSGSGSSYGSGRSGSGSSHGGTRGGKVTTRRVAPKSG
GSSAQPVSSLDKDNQLNIADFSIGDKVTHDKFGLGTVVDLQDKGRNSVITVDFGSAGTKR
LMLRVAPIEKL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaggatcccgatgtcatcgcacgcaccgccgaggaactcgtgggcgacctcaat
ccgcagcagggcgaggccgtgcaataccaaggcccggcgctgctgatcggcgcgggcgca
ggctcgggcaaaacccgagtgctcacccgccgcatcgcgtggatcctcagccaattcggc
gcatggcccagccagatcctcgccatcaccttcaccaacaaagccgccgccgaaatgcgc
gaacgcctcgccaccctgatcgggccggtcgcccaacgcatgtgggtgtcgaccttccat
tcggcctgcgtgcgcatcctgcgccgcgacggccagtccatcggactcaaatcgggcttc
tccatctacgattccgccgattcggaacgcctgatcaaaatcatcgccaccgaattcaat
ctggacgtcaagcgctacaccccgcgctccatcctgggcaagatctccgacctgaagaac
aatctgaccggatggcaggaatacctcgccgcgcacgccccggacttcacgcccggccag
cgaggctaccagttcggccatgccggcgatctggaggccatccacgcggtcctctacgcc
gaatacgagcatcgtctgggattggccaacgccgtcgacttcgacgacctgatcggccgc
accgtcgaactgctgcgcaaggacccgcaggtggccgactactaccaccaccgcttccgc
tacatcctcgtcgacgagtatcaggacaccaaccacgcccaatacgtgcttgtgcgcgaa
ctcgccggagtggacgcgcgcgaatccgcggacgccacgcccggcggcaacggtcggttc
gccggcaaaaccggccccgcatggatcaccgtcgtgggcgactccgaccagtccatctac
gccttccgcggcgcggacatccgcaacatccaggacttcgagcaggacttccccaacgcg
aaaaccatcatgctcgaacagaactaccgctccacgcagaccatcctcgacgcggccaac
gccgtcatcaccaacaacgagggccgcaaaccgaagaaactgtggaccgccatgggcaaa
ggcgagccgatcgtgggctacgcggccgacaacgcgcagcaggaggccgcatgggtggcg
ggcgagatcgcgcgcctgcacgccgaggaaggcatcgcctactccgacatggccatcatg
taccgcgccaacgcgcagtcgcgctcgctggaagaggcgctgatcaacggtggagagccc
taccagctggtcggcggcacgaagttctacgaacgcagggaggtcaaggacgcgctggcc
tacctgcaggcgctcgtcaaccccgacgacgacgtgaacctgcgccgcatcctcaacgtg
cccaagcgcggactcggcgaccgggccgaaggtatcctgctcaactatgcgcgcgagcac
ggcgccagcttcttctacgcgctgatgcatgtggacgagatccaggacatgcccacgcgc
accgccaaccagttgcgggccttccgcgacctgatggcctcgctttcgcagttcacccgc
gcgcatgacgccaaacccagcgaggtcgtggccgaggtgctcgacaagtcgggtctgcgc
gccgacctggagaaatccgtcgacccgcaggacgcctcgcgactggagaacctctcccag
ctgcaatccacggcggcggaattcgagcagaaaaccccggacgccacgctggcgggcttt
ttggagaccacggcgctggtggccgactccgaccagctgcccgacgagggcgaggattcc
ggcaaggtcacgctgatgaccctgcacaccgcgaagggcttggaatacccggtggtgttc
ctcaccggcatggagcagggcaccttcccgcattcgcgcgccatggaggatatcagcgaa
ttgtccgaggaacgccgtctcgcctacgtgggcatcacgcgcgccaagcggcggctgtat
gtgacgcgcgcggccgtgcgctcccagtgggggcaggccagcgacatgatgcccagccag
ttcctcgacgagattcctgacgagctggtcgactggaagcggcgcgaggccggcgtggag
cgtatgcgcggcgcgtgggggcgcgacgagttcgacgatgatttcggtggctgggacgac
gacttctcctccgggacgaccttcggcggctccggttcctcgtatggttcgtcgtacggg
tcgggttcccgatacggttcgtcgtatggttcgggatcgtcgtcgtatggctccggctcg
cgatacggcggatccagccgttccggctccggctcgtatggaggctcatcgtatggttcc
ggttcgagcggccgctcctacggatcgggttccggctcgcgttcgtatgggtcctccggt
tcccgatacggttccggttcgggctcgtcctatggttccgggcgctcgggttccggctcc
tcgcatggcggtacgcgcggcggcaaggtgaccacgcgccgcgtcgctccgaagtccggc
ggttcgtccgcgcagcccgtgtcttcgctggataaggacaaccagctgaacatcgccgat
ttttcgatcggcgacaaggtgacgcacgacaagttcggactcggcaccgtcgtcgacctg
caggacaaggggcgcaattcggtgatcaccgtcgacttcggctccgccggcaccaaacgt
ctcatgcttcgcgtggcaccgatcgaaaaactctaa
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