Bifidobacterium lemurum: BL8807_11405
Help
Entry
BL8807_11405 CDS
T06861
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
blem
Bifidobacterium lemurum
Brite
KEGG Orthology (KO) [BR:
blem00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BL8807_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blem03021
]
BL8807_11405
Transcription machinery [BR:
blem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BL8807_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF1155
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QOL34296
LinkDB
All DBs
Position
complement(2850211..2851611)
Genome browser
AA seq
466 aa
AA seq
DB search
MATKETTATKNTAGMDEELTSAAKKPAARKTSASKKTAGSKKTTAKTAKKPANNDVEAID
EADQLDDVDDLDADQVDDVDLDVEDLDADDLDVAADDDVEVDDDLDAEDIDEDVPDDEDE
AEKAKVPERPKEKGAFVLSDADDEEDAPVRAGNPKRRVIAAGATADPVKDYLKQIGRVSL
LNAEQEVDLSERIEAGLYAQHLLDTEGDTMDFKRKRELKWAASDGKKAKDHLLEANLRLV
VSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQA
RTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISL
HTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLED
GQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgaaggaaacgacggcaaccaagaacacggctggtatggatgaggagctgacc
tccgccgccaagaagccggccgcgcgcaagacctccgcctctaaaaagaccgccggaagc
aagaagaccacggccaaaaccgccaagaagcccgcgaacaacgacgtcgaagcgatcgat
gaggccgatcagctcgacgacgtcgacgatctggacgccgatcaggtggacgacgtcgat
ctggacgtcgaggatttggacgccgacgacctcgatgtcgccgccgacgacgacgtcgaa
gtggacgatgatctggacgccgaggatatcgacgaggacgtgccggacgacgaggacgag
gccgagaaggccaaggtccccgaacgtccgaaggagaagggcgcgttcgtgctgtccgac
gcggacgacgaggaggatgcgcccgtccgtgccggcaatccgaagcgtcgtgtgatcgcc
gcgggcgccaccgccgaccccgtcaaggactacctgaagcagatcggccgcgtgagcctg
ttgaacgccgaacaggaggtcgatctttccgaacgcatcgaggccggtctgtacgcgcag
catctgctcgacaccgaaggcgacaccatggatttcaagcgcaagcgcgaactcaagtgg
gcggcgtccgacggcaagaaggccaaggaccacctcttggaggccaacctgcgactcgtg
gtgtcactggccaagcgctacaccggtcgcggcatgctcttcctcgatctcatccaggaa
ggcaacctcggtctgatccgcgccgtcgagaagttcgactggaagaagggcttcaagttc
tccacctacgccacctggtggatccgccaggccatcacccgcgccatggccgaccaggcg
cgcaccatccgcgtgcccgtgcatatggtcgaagtgatcaacaagctcagccgcgtgcag
cgtcagatgctgcaggacctcggccgcgaacccacgcccgacgagctggcccgcgagctc
gacatgcccgtcgagaaggtgcaggaggtgcagaagtacggccgtgagccgatttcgctg
cacaccccgctgggcgaggacggcgattccgaattcggcgacctcatcgaggacaccgac
gccatcgccccgtccgacgcggtcgcgttctcgctgctgcaggagcagttcaagcaggtg
cttgagaccctgtctccccgcgaggccggcgtgatcaaaatgcgctacggccttgaggac
ggccagcccaagacgctcgacgacatcggccgcgtgtacggcgtgacccgcgaacgcatc
cgccagatcgagtcgaagaccatgtccaagctgcgccacccctcccgttcgcagaccctg
cgtgacttccttgatcaatga
DBGET
integrated database retrieval system
