Lederbergia lenta: NCTC4824_00133
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Entry
NCTC4824_00133 CDS
T06924
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
blen
Lederbergia lenta
Pathway
blen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC4824_00133 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blen03021
]
NCTC4824_00133 (rpoC)
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_00133 (rpoC)
Enzymes [BR:
blen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC4824_00133 (rpoC)
Transcription machinery [BR:
blen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC4824_00133 (rpoC)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC4824_00133 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
SQI51184
UniProt:
A0A2X4YS52
LinkDB
All DBs
Position
1:118958..122548
Genome browser
AA seq
1196 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRALEEIIYFASYVVTDVGDTTLDKKQLLSEREYRAYREKYGATFQAAMGAEAIKKLLQ
DIDLEKEVAQLKEELKTAQGQRRTRAIKRLEVLEAFRHSGNFPDWMILDVLPVIPPELRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERIHPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPRDGKPVVTPSQDMVLGNYYLTLERKNADGEGMIFKDTNEALIAYQNGYVHLHSRIAVR
ADSLINERFTEEQRKQLLVTTVGKLVFNEILPPSFPFINEPTNENLEGNTPDKYFIEPST
NVAEFIKQQPLIEPFKKKILGNIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLAEKETLLNDAQEKVDNVLKQFKRGLITDEERYDRVISIWSAVKDTIQNKLMKTL
DNLNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIREDDCGTDKGLLVASLKDGTEIIEPLE
ERLIGRHARKKIIHPETGAVLVTENELIHEDLAKEVVNAGIEEVWIRSAFTCNTRHGVCK
KCYGRNLATGTVVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVITEISGVVTAITEGRDRQQEIVVQSEIDSRTYTAPYTARLKVAVNDEVER
GQVLTEGSIDPKELLQVRDVSAVQEYLLLEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
ADAGNTDVLPGTLLDVHQFTDANEKALLEGKQPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRKAVSIMAGEEVPNAE
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatgtaaacaattttgagtatatgaaaatcggccttgcttcaccggataaaatc
cgatcctggtcttttggagaagtgaaaaagccggaaacaatcaactatcgtactttaaaa
ccagaaaaagatggcttattctgtgaacgaatattcggtcctacaaaggattgggaatgt
cattgcggaaagtataagcgagtccgttataaaggtgttgtctgtgaccgttgtggagta
gaagtaactagagcaaaggttcgtcgtgagagaatggggcatattgaattagctgcccct
gtttcccacatatggtatttcaaagggattcctagtcggatgggacttattctagatatg
tcacctagggctcttgaagagattatttactttgcttcttatgttgttacagatgttggt
gatacaactttagataagaaacagttgttatctgaaagagagtatcgagcataccgtgag
aaatacggtgcgacattccaagcagcaatgggtgctgaagctattaagaagcttttgcaa
gacattgatttggaaaaagaagtggctcaattaaaagaagaattgaaaactgcacaaggg
caacgacgcacaagagctattaaaagacttgaggtgctcgaagctttccgtcattctggg
aatttcccggattggatgattctagatgttttaccggttattcctccagaattgcgacca
atggttcaattagaaggtggccgattcgcgacatctgacctaaatgatctatatcgtagg
gttatcaaccggaataatcgattgaaaagattattggatcttggtgctccagggattatt
gtgcaaaacgaaaaacgtatgctccaagaagcagtggatgctttgattgataatggtaga
agaggccgtcctgttacaggaccgggaaatcgaccgttaaaatcactttcacacatgctg
aaaggaaaacaaggtcgtttccgtcaaaacttacttggaaaacgtgtggattattcaggt
cgatctgtaattgtcgttggaccgaacttgaaaatgtaccaatgtggacttccaaaggaa
atggctcttgaactattcaaaccttttgttatgaaggagctagttgaaaaaggccttgca
cataatattaaaagcgccaaaagaaaaattgaacgaattcatcctgaggtttgggacgta
cttgaagaagttattcgcgagcacccagtattattaaacagggcaccgacacttcataga
cttggtattcaagcatttgaaccaacgcttgttgaaggaagagcaatccgtcttcaccca
ctagtatgtacggcttataatgcggactttgacggtgaccaaatggcagtgcatgtgcct
ttgtctgcggaagcacaagcagaagcacgtattcttatgctagctgcccaaaacattttg
aacccaagagatggtaagccggtcgttacaccgtcacaagatatggtgttgggtaactac
tatctaacgctcgaacgtaaaaatgcggacggcgaagggatgatttttaaagatacgaat
gaagctctgattgcataccaaaacggatatgttcatcttcactcacggatagctgtccgt
gcggattcgttaatcaatgagagatttacggaagaacagagaaagcaattacttgttaca
actgtgggcaaacttgttttcaatgaaatattgccgccgtcattcccgttcattaacgaa
ccaacaaacgagaatttggaaggaaatacaccagataaatactttatagaaccgtcaacc
aatgttgcggagtttattaaacaacaaccgcttattgaaccgttcaaaaagaaaatttta
ggtaatattattgcggaaatttttaagagattccatatcacagagacatcaaaaatgctt
gatcgtatgaaaaaccttggatttaagtactcgacaaaagctggtattactgttggagta
tctgacattgtagttttagctgaaaaagagacactcttaaacgatgcgcaagagaaagtt
gataatgtactaaaacaatttaaacggggtcttattactgacgaagagcgttatgatcgt
gtcatttctatttggagtgctgtcaaagatacgattcagaataaattaatgaaaacatta
gacaacttgaatcctatttatatgatgagtgattctggagcaaggggtaacgcatcaaac
tttacgcagctagctggtatgcggggcttgatggctaacccggctggacgaatcatcgaa
ttaccgatcaaatcaagttttagagaaggattaacagtccttgagtactttatctctaca
catggtgctcgtaaagggttagctgatactgctcttaaaactgcggactctggttattta
actagaagacttgttgatgtagctcaagatgtaatcattcgggaagatgattgtggtaca
gataaaggattacttgttgcgtcgttgaaagatggaacagagataatcgagccgctggaa
gagcgactaattggacgtcatgcacggaagaaaatcattcatccagaaacaggcgctgta
cttgttacagagaacgaattgattcatgaagacttagctaaagaagtagttaacgctgga
atcgaagaagtatggattagatctgcatttacatgtaatactcgtcatggcgtatgtaaa
aaatgttacggacgtaacttggcaactggaacagtagttgatgtaggagaagctgtaggt
attattgctgcacaatccattggtgaaccaggaactcagttgacgatgcgtacattccat
acgggaggcgtagctggagacgatattactcaaggtcttccgagaatccaagagttgttc
gaagcgcgtaacccgaaaggtcaagcagtcattactgaaattagtggggtagttaccgct
attacagaaggacgagatcgccagcaagaaattgttgttcaaagcgaaatagatagccgg
acatacacagctccttacacagctcgcttaaaagtagcggtcaatgatgaagtagagcga
ggtcaagtattgacggaaggttcgatagatccaaaagagcttctgcaagttcgggatgtc
tcggcagtacaagaatacttgttactggaagttcaaaaggtatatcgtatgcaaggtgtt
gaaattggtgataaacacgtagaagtaatggttcgccaaatgcttcgaaaagtgcgggtc
gctgatgctgggaatacagatgtattgccaggaacacttctcgatgtacatcaatttact
gatgccaacgaaaaggcattgcttgaaggaaagcaacctgcaacaggtcgtccagtactt
cttggaattacaaaggcgtcacttgagacagattcattcttgtccgccgcatccttccaa
gagacgacaagagtattaacagatgcagctatcaaaggcaagcgcgacgaactattagga
ctaaaagaaaatgttattattggtaagttagttcctgctggaacgggtatgcaacgttat
agaaaagctgtctcgattatggcgggagaagaagtaccaaacgctgagtaa
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integrated database retrieval system
