Lederbergia lenta: NCTC4824_00168
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Entry
NCTC4824_00168 CDS
T06924
Symbol
rpoA
Name
(GenBank) RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
blen
Lederbergia lenta
Pathway
blen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC4824_00168 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blen03021
]
NCTC4824_00168 (rpoA)
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_00168 (rpoA)
Enzymes [BR:
blen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC4824_00168 (rpoA)
Transcription machinery [BR:
blen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC4824_00168 (rpoA)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC4824_00168 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Dockerin_1
DUF961
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
SQI51297
UniProt:
A0A2X4VGC5
LinkDB
All DBs
Position
1:141594..142538
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQLEG
VQHEFSTVEGVVEDVTNIILNIKKLALKVYSDEEKTLEIDVQGDGVVKASDIMHDSDVEI
LNPDLHIATLGENANFRVRMSARRGRGYTPADQNKRDDLPIGVVPIDSIYTPVSRVNYQV
ENTRVGQMTNYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLDDLGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaagccgaaaattgaaacgattgagatcagcgatgatgctaaatac
gggaaattcgttgtagagccacttgagcgtgggtatggtacaacgttgggtaactcctta
cgtcgtattttattatcttcccttcctggggctgctgtcacatccattcagttggaaggt
gttcagcatgaattttcaacagttgaaggtgtcgttgaagatgtgactaatatcatcctc
aacatcaaaaaattagctttgaaagtttattctgatgaagaaaaaactttagagatcgat
gtacaaggtgatggcgttgttaaggcttctgatattatgcatgatagtgatgtagaaata
cttaatcctgatttgcacattgcaacattaggggagaatgctaacttccgagtgcgtatg
tcagcaagacgtggccgcggctatactccggcagatcaaaacaaacgtgatgacttgcca
attggtgttgtaccaatcgattctatctatacccctgtttcacgtgtaaactatcaagtt
gaaaatacacgtgtaggtcagatgactaactatgataagctttctttagatgtatggaca
gatggaagtatcggaccgaaagaagcaatttctttaggtgccaaaattcttaccgagcat
ttgaatatttttgttggtttaactgatgaagctcaaaatgcagaaataatggtagaaaaa
gaagaagaccagaaggaaaaagttcttgaaatgacaattgaagagctggatctttcagta
cgttcatacaactgcctaaaacgagcaggaatcaatactgtccaagagctggctaataag
acagaagaggacatgatgaaagttcgaaacttaggaagaaaatctctagaagaagttaaa
gccaaattggatgatcttggacttggacttcgtaaagatgactga
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