Lederbergia lenta: NCTC4824_00301
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Entry
NCTC4824_00301 CDS
T06924
Symbol
licR
Name
(GenBank) PRD domain-containing protein
KO
K03483
mannitol operon transcriptional activator
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
blen03000
]
NCTC4824_00301 (licR)
Transcription factors [BR:
blen03000
]
Prokaryotic type
Other transcription factors
BglG family
NCTC4824_00301 (licR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRD
HTH_11
Mga
PTS_EIIA_2
PTS_IIB
HTH_DeoR
HTH_Mga
HTH_Tnp_ISL3
HTH_36
HTH_23
HTH_24
GerE
Motif
Other DBs
NCBI-ProteinID:
SQI51537
UniProt:
A0A2X4VH16
LinkDB
All DBs
Position
1:273572..275647
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AA seq
691 aa
AA seq
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MYITTREKDIIELIIKTAGKHTASSIAGYLHVSTRTVQRDLKAIEKILQFFQLELVRKTN
KGLLIEGKNEQIFRLIQHLAKLDPIDQTPHERKLLLLLALLQEEFYTIQILAKDLGVSIT
TLTTYLDEIEVWLANFNMYIARKRGVGIEIIGTEPNKRKALARFFLFYFSEELIESLFLL
ENGKSKQEVLLHYLNPDYLLTINKLVNATFNRSQLHLADSDYIGFIVHICITLQRKEDGF
LLRTEEEDTTELTHEYNLIKKICAELEKVYSISLAKEDLLYLAIILKGSKLQEVTDLSYD
KVMLSQVIRNLIIDVSTKLHVDLTNDFSLYQGLLAHMEPSLYRLEQKMGLFNPLKEEIKQ
KYPLLFMAVKSFVEEEFKDIGDFPDDEIAFIVLHFGSALVMKEEQLSIKALVLCPTGIGT
SKMLASRIKKEIIEIDEVEIKSIKDIQEKKNLKSYDLIISTVRLPFIDIDYILVSPLLSA
ENIMAIKSYLKNNMESLTKDKQYIEPAQKEVPVRGELSVILQELMDVHQSIDAVIKNFGV
YRTRNTEHKEIIKEMVNQAKKDKILTDDKQVIVTLQDREKQGGLGIPNTGMALFHCRHVE
VKELMFQISHLEVPCLVKGMDGNDMYMKNLLLMLAPEELSIREQEIVSLISTSLIESKEA
MLIFSSANEEAIRTKLEATFLDYLHTTLIKD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtacattacgacgagagaaaaggatattattgaattaattatcaaaacggctggaaaa
catacagcgtcttctatcgcgggatatctacatgtcagtaccagaacagttcagcgtgat
ttaaaagcgatagaaaaaatacttcagttttttcaattggagttagttcgcaagacaaat
aaaggattgttaattgaaggcaagaatgaacaaatatttcgtctaattcagcatttagca
aagttagatccaattgatcaaacaccacatgaaagaaaactacttctactattggcttta
ttacaggaagaattctatacgatccaaattttagcgaaagaccttggtgtgagtattaca
accttaacgacttatttggatgaaatagaagtttggctagctaattttaatatgtacatt
gctagaaaaagaggtgtagggattgagattattgggacggaacctaataaacgaaaagcc
ttagcacgttttttcttattttattttagtgaagagctcattgaaagtttatttttatta
gaaaatggaaagagcaaacaagaagtgcttttacattatttgaatcccgattatctccta
actataaataagttagtaaacgctacgtttaatcgttcacaactgcatctggcagatagt
gattacatcgggttcattgtacatatctgtattaccttgcaaaggaaagaggatggcttt
cttttaagaacagaagaggaagatacaactgaactaactcatgaatataatttgataaaa
aagatatgtgccgagttggaaaaagtatattccatttccttggcgaaagaagatttgctc
tacctagcaattatcctgaagggttctaagctccaagaggtaacagacctttcatatgac
aaagtaatgcttagccaggtgataaggaatttaataatagatgtatcaaccaagcttcat
gtagatttaacaaatgacttttctttgtaccaagggcttttagctcatatggaaccatct
ctttaccgtcttgagcaaaaaatgggattatttaacccgttgaaagaggaaataaaacaa
aagtatccgctcttatttatggctgttaagagctttgtagaggaagaatttaaagatatt
ggtgattttccagatgatgaaatagcctttattgtcctccactttggttccgcattagtg
atgaaagaagagcaactatctattaaagcattagttttatgcccaacaggtataggaact
tctaagatgctggcaagtcgaattaagaaggaaatcatagaaattgatgaggtagagatt
aaatcgataaaagatattcaggagaaaaaaaacttaaaaagctatgatctgattatctca
acagtaagacttccatttatagacattgattatatcctagtttccccacttttaagtgct
gaaaatattatggcaatcaaaagttatttgaaaaataatatggaaagcctaacgaaagat
aagcaatatatagagcccgcacaaaaggaagttccagtaagaggggaactgtccgttatt
ttgcaagagctgatggatgtacatcagagcatcgacgctgtgataaagaattttggtgtt
tatcgaacgcgaaatacagaacataaagaaattattaaagaaatggtaaatcaagctaag
aaagataagattttaacagatgataagcaagttatcgttaccttacaagatcgagaaaaa
caaggtggacttggcataccaaatacaggcatggctcttttccactgtaggcatgtggaa
gtgaaagagttaatgttccaaatctctcatttggaagttccttgcttagttaagggtatg
gatgggaatgacatgtatatgaagaacttactattgatgttggcgcctgaagagttaagt
ataagggagcaggaaatagtaagtttgatcagtacaagcttaattgaaagtaaggaagca
atgttaattttttcttcagcaaatgaggaagcgattcgtacaaagttagaggcaactttt
ctagattatcttcatactactttaataaaggactga
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