KEGG   Lederbergia lenta: NCTC4824_00749
Entry
NCTC4824_00749    CDS       T06924                                 
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
blen  Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:blen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:blen03021]
    NCTC4824_00749 (sigB)
Transcription machinery [BR:blen03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NCTC4824_00749 (sigB)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HNF-1_N HTH_23 DUF134 HTH_3 DUF1492 HTH_28 PhyR_sigma-like HTH_37 GerE RE_TdeIII Sigma70_ECF HTH_Crp_2 KORA HTH_16 TetR_C_36
Other DBs
NCBI-ProteinID: SQI53259
UniProt: A0A2X4VSN0
LinkDB
Position
1:740182..740976
AA seq 264 aa
MSKQSRPDSSKTDVNKWIKAYQLHEDEEAQNQLVLHYKNLVESIARKYSKGKSFHEDIFQ
VGIIGLLGAIRRYDETFGKSFEAFAIPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKNT
VEELTRELQRSPQIHEIASYLGESEEVILEAMEMGKSYQALSVDHSIEADSDGSTVTLLD
IVGNVDTGYEKVNQRLVLEKVLHVLSEREKNIIQYTYLENMSQKEAGEMLGISQMHVSRL
QRRAIKKLREAIHAESLNAESTSL
NT seq 795 nt   +upstreamnt  +downstreamnt
atgtcgaaacaatctcgacctgatagttcgaaaacagatgtaaataagtggattaaagca
tatcaactacatgaagatgaagaagctcaaaatcaacttgttttgcattataagaattta
gttgaatctattgctcgtaagtattcgaaaggaaaatcctttcatgaagatatatttcaa
gtcggtattattggactccttggtgcaattcgccggtatgatgagacattcgggaaatca
tttgaagctttcgccatcccaacgatcattggcgaaataaagcgatttttgcgggataaa
acatggagtgtacatgtgcctcgcagaattaaagagttaggccctaaaattaaaaataca
gttgaggaattgacgcgcgagctacagagatctcctcaaattcatgagattgcatcatat
ttaggtgaatcagaagaagtaatacttgaagcaatggagatgggcaaaagttaccaggcc
ctatctgttgatcattcgattgaagcagattctgacggtagtactgttactttacttgat
attgtaggaaatgtagatacgggttatgaaaaggtaaaccaacgtcttgtgttggaaaaa
gtcttacatgttttatcagagagagagaaaaacattattcagtatacttatttagaaaat
atgagccagaaagaggcgggggaaatgcttggtatctcacagatgcatgtatctcgtttg
caacgccgtgccattaaaaaattaagagaagcgatccatgcagaatctctaaatgcggag
agcacctctttatga

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