Lederbergia lenta: NCTC4824_00917
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Entry
NCTC4824_00917 CDS
T06924
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blen
Lederbergia lenta
Pathway
blen03420
Nucleotide excision repair
blen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC4824_00917 (pcrA)
03430 Mismatch repair
NCTC4824_00917 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_00917 (pcrA)
Enzymes [BR:
blen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4824_00917 (pcrA)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC4824_00917 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC4824_00917 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SQI53467
UniProt:
A0A2X4VMR0
LinkDB
All DBs
Position
1:897610..899844
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AA seq
744 aa
AA seq
DB search
MFFIGGVDVEILTGRLLEGLNPEQGEAVKATDGPLLIMAGAGSGKTRVLTHRVAYLMVEK
GVNPYNILAITFTNKAAREMKERIGHIMGDAAESVWISTFHSMCVRILRRDIDRLGYNRN
FTILDTTDQLSVIKNILKAKNIDPKKFEPRAILGAISSAKNELVSTKEYEKQASGYYAQV
ISDVYTEYQRRLRRNNALDFDDLIMITIQLFDQVPEVLEFYQRKFQYIHVDEYQDTNRAQ
YMLVKLLAARLKNLCVVGDSDQSIYRWRGADIANILSFEKDYPNAQVIILEQNYRSTKRI
LEAANEVIKNNPNRKPKNLWTDNTPGEKITYYRADGEQSESQFVAGKIKELCQGQNRKLS
DFAVLYRTNAQSRVIEEVLLKSNIEYNIIGGTKFYDRKEIKDLLAYLRLIANPDDDISLQ
RAINVPKRGIGATSIDKIARYAQDHDISLFVALNEIDFIGLTGRAANAAADFHALIRNYT
QMQEFLSVTELVEEVIEKSGYKEMLIAEKSLEAESRLENINEFLSVTKSFEDSNDDKSLI
AFLTDLALVADIDKLDEDGTPGEAITLMTLHAAKGLEFPVVFLIGMEEGVFPHSRSLMEE
EEMEEERRLAYVGITRAEEELFITNAQMRTLFGRTNMNPVSRFIAEIPGELLEDVQAEQR
QSVSSGFSKKTQQRAKPVFRSVAKPDITNNVSWNVGDKAEHKKWGIGTVVSVKGDNEGVE
LDIAFPSPTGIKRLLAEFAPITKV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttctttataggtggtgtagacgtggaaatattaacagggcgtcttcttgaagggtta
aaccctgaacaaggggaggcagtaaaagcaacggacggacctttattaataatggctggt
gcaggtagtgggaaaacgcgagtgcttacacatcgcgttgcatatttaatggtggaaaaa
ggcgtgaatccgtataatatcttggcgatcacatttacaaataaagctgctcgtgaaatg
aaagaacggatcggacatattatgggggatgcagctgaaagtgtatggatttcaacattt
cactctatgtgtgtgcgtatattgcgtcgagatatcgacaggcttggctataatagaaat
tttacaattttagatactactgaccaactgtctgtgattaagaatattttaaaagcgaaa
aatattgatccgaaaaaattcgagcctagagctattttaggagcgattagtagtgcgaag
aacgagttagtatctacaaaagaatatgaaaaacaagcttctggatattacgcgcaagtg
attagcgatgtatatacagagtatcaaagacggcttcgtagaaataatgcgctggatttt
gatgatttaatcatgattacaattcaactttttgatcaagtcccagaagtacttgaattt
tatcaacgcaaatttcaatatattcatgtggatgagtaccaagatacgaatagagctcaa
tatatgcttgtaaagctattggctgctcgtttaaaaaatttatgtgtcgttggtgattcc
gatcagtcaatctatagatggcgcggggcagatattgcaaatattttatcctttgaaaaa
gactatcccaatgcccaagtgattattctagaacaaaattatcgttcaacgaaacgaatt
ctggaggctgcaaatgaagtaattaaaaacaatcccaatcgtaagccgaaaaatttgtgg
acagataatactccgggagagaaaatcacgtattatcgagcagatggtgaacagtcggag
tcacaatttgttgccgggaagattaaagaattatgccaaggacaaaatagaaaactttcg
gactttgctgttttatatcgtacaaatgctcaatcccgtgttattgaggaagtattatta
aaatctaatattgaatacaacattattggcggtactaagttctatgatagaaaagaaatt
aaagatctacttgcatatttgcgtttaattgctaatccagatgatgatattagtcttcag
cgtgcgataaacgtacctaaacgcgggataggtgcaacttcgatagataagattgccagg
tatgcgcaagatcatgatatctcattatttgtggcattgaatgaaatagactttataggc
ttaacaggaagagcagccaatgcagcagcagattttcatgcattgattcgaaattacaca
caaatgcaggaatttctgtcagtaactgaattagtagaggaagttattgaaaaatcagga
tacaaggaaatgttaattgctgaaaagtcattagaggcagaaagccgtcttgagaatatt
aatgaattcctttctgttacgaagagttttgaagatagcaatgatgataaaagtttaatt
gcatttctaacggacttagcgttggttgcagatatagacaagctagatgaagatggtacc
cctggagaagcgattacattaatgacacttcatgctgcaaaaggattggagttcccggta
gtatttttaattggcatggaggaaggagtctttccacacagccgttcgttgatggaagaa
gaagaaatggaagaagagcgaagacttgcatatgtagggattactcgagcagaagaagaa
ttatttattacaaatgctcaaatgagaacattgtttggtcggacaaatatgaatcctgtt
tcccgatttattgctgaaataccgggagaattactagaagatgtgcaagctgaacaaaga
caaagcgtgtcttctggattttctaagaaaacacagcaacgagcaaagccagtttttcgg
agtgtggctaagccggatattacaaataatgtcagttggaatgtcggagataaagcagaa
cacaaaaaatggggtatcggtacggttgtcagcgtaaaaggcgataatgaaggtgtggag
ctagatattgcatttccaagtccaactggaataaaacgactgctagctgaatttgctcct
attacgaaagtataa
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