Lederbergia lenta: NCTC4824_00952
Help
Entry
NCTC4824_00952 CDS
T06924
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
blen03009
]
NCTC4824_00952 (rumA)
Enzymes [BR:
blen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC4824_00952 (rumA)
Ribosome biogenesis [BR:
blen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC4824_00952 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
PrmA
Methyltransf_15
Methyltransf_11
RrnaAD
N6_N4_Mtase
UPF0020
PCMT
TRM
Methyltransf_4
Ubie_methyltran
N6_Mtase
Methyltransf_12
TPMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
SQI53548
UniProt:
A0A2X4W0D6
LinkDB
All DBs
Position
1:933521..934894
Genome browser
AA seq
457 aa
AA seq
DB search
MSKTKAPINKNDYIDVTFEDLTHDGNGVAKVDGYPLFVANGLPGEKAKVKVTKLNKGYGF
GRLMEVYEESEHRVVPTCPIYAQCGGCQLQHLSYEGQLLAKEKQVRDVMERIGKLENVTI
HPVLGMEDPWRYRNKAQVPIGEREGGLIGGFYQRRSHDIIDMDECVIQHEQNDVVLRKVK
EICGKYGVKAYDEKANKGVLRHVMIRYGIVTGEIMVVLITRTSDLPNQKKIIEEVTKAIP
GIKSIVQNVNKKRTNVIFGEQTKVLWGEEVIYDYIGDIKFAISARSFYQVNPEQTKVLYD
KALEYAGLSGNENVIDAYCGIGTISLFLAKKAKKVFGVEIIPEAIEDARKNAELNGITNA
EFAVGEAEVVIPNWYKQGNKADVLVVDPPRKGCDQALLDTIINMKPEKVVYVSCNPATLA
RDLRILEDGGYKTVEVQPVDMFPHTTHVECVALIELK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaccaaagctccgattaataagaatgattatatagatgttacgtttgaagac
ttaacacatgacgggaatggcgttgcaaaggtagatggctatccattatttgtggccaat
ggtttaccaggagaaaaagcgaaagtgaaagtaacgaagttgaataaaggatatggcttc
gggcgtttaatggaagtatatgaagaaagtgaacatcgtgtagtcccaacatgtcctatc
tatgcacaatgcggtggttgtcagttgcagcacttgagttatgaagggcagctccttgct
aaagaaaagcaggttcgggatgtcatggagcgaattgggaagctagaaaacgtgactatt
catcctgtgcttggtatggaagatccgtggcgttatcggaataaagcacaagttccaatt
ggtgagcgagaaggcggattaattggtgggttttatcaacggagatcacatgacatcatt
gatatggatgaatgtgttattcagcatgaacaaaacgatgtcgtattgcgcaaagtgaaa
gaaatctgtgggaaatacggtgtgaaagcatacgatgaaaaggcgaataaaggagtcctt
cgtcatgtgatgattcgctatggaatcgtaacaggcgagataatggtcgttttaattaca
cgcacatctgatttaccaaatcagaaaaaaatcatcgaagaagtaacgaaggctatccca
ggaataaaatcgatcgtacaaaatgtaaataaaaaacgcacgaatgttatttttggcgaa
caaacgaaagtactgtggggagaggaagtcatctacgactatattggtgatattaaattc
gccatatcagctcgatctttttaccaagtgaacccagaacaaacgaaggtcctttatgat
aaggcattggaatacgctggtttaagtggtaatgaaaatgtcattgatgcctattgtggc
attggcactatctctcttttcttagccaaaaaggcaaagaaagtatttggagtcgaaatt
attcctgaagcaatagaagatgcaagaaaaaacgctgaactaaacggcataacaaacgct
gaatttgccgtcggcgaagcggaagtcgtcatacctaattggtataaacaaggcaacaaa
gcggacgttctcgttgttgatccacctcgtaaaggctgcgaccaagccttgcttgataca
attatcaacatgaaaccagaaaaagtcgtttatgtatcatgcaacccagctaccttggca
cgtgatttaaggatattggaagatggtgggtataaaacggtggaagtgcagccagtggat
atgtttccacataccacgcatgtggagtgcgtggcgttgatagagttgaaatag
DBGET
integrated database retrieval system
