Lederbergia lenta: NCTC4824_01350
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Entry
NCTC4824_01350 CDS
T06924
Symbol
pdpF
Name
(GenBank) penicillin-binding protein 1A
KO
K03693
penicillin-binding protein 1B
Organism
blen
Lederbergia lenta
Pathway
blen00550
Peptidoglycan biosynthesis
blen01100
Metabolic pathways
blen01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC4824_01350 (pdpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC4824_01350 (pdpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
blen01003
]
NCTC4824_01350 (pdpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
blen01011
]
NCTC4824_01350 (pdpF)
Glycosyltransferases [BR:
blen01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NCTC4824_01350 (pdpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
blen01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NCTC4824_01350 (pdpF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PRC
Caud_bapl16_3rd
Motif
Other DBs
NCBI-ProteinID:
SQI54912
UniProt:
A0A2X4W7K4
LinkDB
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Position
1:complement(1373727..1376666)
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AA seq
979 aa
AA seq
DB search
MTTQGNNKWSQVKTAISALKYKKIIKGARITYGVVWNLVLLLLIVLLIGGAFAGGVGAGY
FASLVKDEEIRPAENMIKDIHQYEETSKLYFDNDVFLGKLRSDIDREEVSIDQVSDYLKK
AVIATEDEYFYEHHGVVPKALLRAVFQEFTNSAVQTGGSTLTQQLIKNQILTNEVSFDRK
AKEVLLALRIERILEKDDILEAYLNVSTFGRNSSGQNIGGVQAAAQGIFGVDAKDLNLPQ
SAFIAGLPQSPFGYTPFTNQGERKSPELLEPGLKRLKTVLTRMHREGYISDKEYKEAVDY
DITADFIKKQPRSFEQYPALTFEIEERAVKVMTEVLAAKDGIKKEELEKDDKLYGKYWTL
ADRDIRQNGYQIHSTINKKIYDAFDKAKDEYQNYGYTKKREKTNPETGKVEIVDDPVQVG
AFLMENKTGKILSFVGGRDFELEQMNHATQSLRPNGSTMKPLLVYAPAIELGLSAPGSIV
ADVPITVANGSSGTHTFKNYSTGRYYGLVTAREALANSYNASAIYTYLKIKDQNPTQYLD
KMGISSLTTVDRESYSAALGGLQEGVTVEENTNAFSTFANDGKFIDAYMIDKITDRDGNI
VYEHKSKPVDVFSPQTAYLMIDMMRDVIKSGTARTLPNMLKFSADWAGKTGTTTGPNDAW
LIATNPNVTFGTWIGYDKQAPLSSDGSESRRNYGIWAKLMNAAYDVEPDIINPKKSFKMP
GGIVSRSFCAVSGLLPSEACSKAGLVQTDIFNAKFVPGKRDDSLGSGRYVMANGKKYMAL
DSTPKEFTEPGMLIDPDFIKRITQGRVNDISQLIPQNDARWKNVLIANAKLKDDGSAPSA
VKASISGTSISWSASANNDVVGYRVYSEDGKKIASIRSGDTLSYKAGDAAYYVVAVDVAG
RESAPSNKVGKTKEERKKEEEDKKKVAEAKAEAEKKKIAEENTKKQEEAQKKAEAEKIKQ
EQEKKKKEQEEAAKEENNN
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcaaggaaataataaatggagccaggtaaaaacggccatttccgctttaaaa
tacaagaaaattattaaaggcgcgcgtatcacctacggggtcgtttggaatttagttctt
ctcctactcatcgttctactaatcggtggagcattcgctggaggagtcggagcgggctat
tttgcttctctcgtaaaagatgaagaaattcgaccagcagaaaatatgattaaagatatc
catcaatatgaagaaacttctaaactatattttgacaatgatgttttcctcggaaaactt
cgctctgatattgatcgtgaagaagtaagtatcgatcaagtttccgattacttaaaaaag
gcagtcatcgcaacagaagatgaatatttttatgaacatcatggtgtagtgccgaaagca
ttactacgagctgtatttcaagaatttacaaattcagccgtacaaaccggtggtagtaca
ctgacacagcaactaattaaaaaccagatattaacaaatgaagtatcgtttgaccgtaaa
gccaaagaagtattattagcacttagaatcgaacgaatccttgaaaaagacgatatttta
gaagcctatttaaatgtttctacatttggtcgtaattcatcaggtcaaaatattggtggt
gtacaagcagctgcccaaggaattttcggtgtagatgcaaaagatttaaacttaccacaa
tctgcatttattgctggattaccgcaaagtcctttcgggtatacaccttttacaaatcaa
ggtgaaagaaaaagtcctgaattgctagaacctggtttgaaaaggctaaaaacagttctg
actagaatgcatcgagaaggttatatctctgataaagaatataaagaagcagtagattat
gatattactgctgacttcattaagaaacaacctaggtcatttgagcaatatcccgctctt
acgtttgaaatcgaagagcgcgcagttaaagtgatgacagaagtccttgctgcaaaagat
ggtattaaaaaagaagagttggagaaagacgataaactttatgggaaatattggactctt
gccgatcgtgatattcgacaaaatggttatcaaatccattcaaccattaataaaaaaata
tacgatgcttttgataaagcaaaagatgaatatcaaaattatggttatacgaaaaaaaga
gaaaaaacaaatccggaaactgggaaagtagaaattgttgatgatcctgttcaagtcggt
gccttccttatggaaaacaagactggtaaaatactaagttttgttggtgggcgggatttt
gaacttgaacaaatgaatcacgctacacaatcactacgccctaatggatcaaccatgaag
ccactcttagtttacgctccagcaatagaacttggtttaagtgcacctggatcaattgtt
gcagatgttccaataacagttgcaaatggtagtagcggaacacatacttttaaaaactat
tcaacaggtcgttattatgggctcgttacagcccgagaagcactagcaaactcttataat
gcttcagccatctatacgtacttaaaaattaaagatcaaaatcctacgcaatacttagat
aaaatgggcatcagctctctcacaactgtggaccgcgagagttactctgccgcacttggc
ggcctccaagagggagtaactgtagaagaaaacacaaatgctttctctacctttgcaaat
gacgggaaatttattgatgcatatatgattgataaaataactgaccgtgatggaaatatc
gtttatgaacataagtcaaagcctgttgatgtatttagccctcaaacagcttacctaatg
atcgatatgatgcgtgatgtaattaaaagcggaacagcacgcaccttgcctaatatgctg
aagttttctgccgattgggcaggtaaaaccggtacaaccacgggccctaatgatgcctgg
ttaattgcgactaatccaaatgttacgtttggtacttggattggttatgataagcaagcc
cctctttcaagcgatggaagtgaaagtagacgtaattatgggatctgggctaagctaatg
aatgctgcctatgatgtagaacctgacattattaatcctaagaagagctttaaaatgcct
ggcgggattgtcagcagatctttctgtgctgtttcaggcttactgccatcagaggcatgt
tcaaaagcaggacttgtacaaactgatattttcaatgcaaaatttgtacctggtaaacgc
gatgatagtttaggatctggacgctatgttatggctaacgggaaaaaatatatggcactt
gactccactccgaaagaatttacagaaccaggtatgttaattgatccagatttcatcaaa
cggattacacaagggagagtaaacgacatttctcaactcatcccacaaaatgatgctcgt
tggaaaaatgtacttatcgcaaacgcaaaactaaaagatgatggttctgcaccaagcgcg
gtcaaggcatctatttctggcacttctatcagttggtcagcatcagcaaataatgatgta
gttggatatcgtgtttattcagaagatggcaagaaaatagcatccattcgttctggcgat
acactatcttataaggctggcgatgctgcgtattatgtagtagccgttgatgtagcgggc
cgtgaatcagctccttccaataaggtaggtaagacaaaggaagagagaaaaaaagaagaa
gaagataagaaaaaagtagcagaagcgaaagcggaagcagaaaagaaaaaaatagcagaa
gagaatacgaagaagcaagaggaagcccaaaaaaaagcggaagcagagaagataaagcag
gaacaagaaaagaaaaagaaagaacaagaagaagcagctaaagaagaaaataataattaa
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