Lederbergia lenta: NCTC4824_01404
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Entry
NCTC4824_01404 CDS
T06924
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
blen
Lederbergia lenta
Pathway
blen03030
DNA replication
blen03410
Base excision repair
blen03420
Nucleotide excision repair
blen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC4824_01404 (polA)
03410 Base excision repair
NCTC4824_01404 (polA)
03420 Nucleotide excision repair
NCTC4824_01404 (polA)
03440 Homologous recombination
NCTC4824_01404 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blen03032
]
NCTC4824_01404 (polA)
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_01404 (polA)
Enzymes [BR:
blen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC4824_01404 (polA)
DNA replication proteins [BR:
blen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC4824_01404 (polA)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC4824_01404 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC4824_01404 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Enkurin
HHH
Motif
Other DBs
NCBI-ProteinID:
SQI54981
UniProt:
A0A2X4VVZ0
LinkDB
All DBs
Position
1:1432012..1434645
Genome browser
AA seq
877 aa
AA seq
DB search
MNKKLMLIDGNSIAYRAFFALPLLNNDKGIHTNAVYGFTTMLMKVLEDEKPTHVLVAFDA
GKTTFRHKTFAEYKGGRQKTPPELSEQFPFIRELLDAYGIERYELENYEADDIIGTLAVK
AAEEGFEVKVISGDKDLTQLATKEVTVGITRKGITDIEVYTPAHIMEKYGLTPEQIIDMK
GLMGDQSDNIPGVPGVGEKTAIKLLKQFPTLEELLENIDQVGGKKLKENLTEFKEQAVMS
KELATITTEAPIEVAIDKLLFEGYDTEKLTAVFKELGFNSLLAKLDGEGTETATEAMLDV
PFQTVESITDDLFAIENSLYIEILEDNYFTAEIAGFGLSNEHGNFYLPTDLVLQSAAFKK
WAEDETKKKWVYDAKRSVVALKRHEINLQGIDFDLLLVSYLLNPSESTDDFAGVAKRHNY
TDVETDEAVYGKGAKKKVAEGDILAEHLARKAVGIASLYDPCLQELEQNEQTELFYELEL
PLALILAKMEYTGIKVDVQRLKEMKKEIGDRLAEIEAKIYRLAGETFNINSPKQLGVILF
ENLGLPVIKKTKTGYSTAADVLEKLEPEHEIIKEILDYRQLGKLQSTYIEGLLKVVHQET
DKVHTRFNQALTSTGRLSSIDPNLQNIPIRLEEGRKIRQAFIPSQEDWVLFAADYSQIEL
RVLADIAKDEKLIEAFTNNMDIHTKTAMDVFHVAPDEVTSNMRRQAKAVNFGIVYGISDY
GLSQSLGITRKEAGQFINRYLESFPGVKDYMDDIIADAREKGFVETLLHRRRYIPEITSR
NFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAARLEKEGLQTRLLLQVHDELIFEAPKD
EIDILKEIVPDVMEHALKLNVPLKVEYSYGASWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaattaatgttaattgatggaaatagtattgcttaccgagcattctttgcc
ttgccgcttttgaataatgataaaggaatacatacaaacgcggtgtacggatttacaacg
atgctgatgaaggtgcttgaagatgaaaagccaacccacgttctagttgcatttgacgct
gggaaaacaacttttcgccataaaacatttgcggaatataaaggtggacgccaaaaaact
ccaccagaactgtcagaacaatttccattcataagagaattactagatgcttatggaatt
gaacgctatgaacttgaaaactatgaggccgatgatattattggcacacttgctgtgaaa
gctgcagaagaaggtttcgaagtaaaagttatttcaggggacaaggatttaacgcaatta
gcgacaaaggaagtaacagtgggaatcacgagaaaaggtatcacggacattgaagtgtac
acgcccgctcatatcatggaaaagtatggtcttactcctgagcaaatcattgatatgaaa
ggtttaatgggagatcagtctgataatattccaggtgtacctggagtaggggagaaaacg
gcaataaagcttttaaaacaatttcccacactagaagaattacttgagaacattgatcag
gttggcggtaaaaagttaaaagaaaatttgactgaatttaaggaacaagcagtgatgagt
aaggagcttgcaacgattacaacagaagcgcctatcgaggtagctattgataagctatta
tttgagggctatgatacagaaaaattaactgctgtttttaaagagcttggttttaactca
ttacttgcaaaattagatggagaaggaacagaaactgctacagaagcaatgcttgatgtt
ccttttcaaacagtggagtctatcactgatgatttatttgcgatagagaattcattgtac
attgaaatattagaggataattattttactgcagaaattgctggttttggattgtcaaat
gaacacggtaatttttatttgccaacagacttagtacttcaatctgctgcttttaaaaaa
tgggcggaagatgaaacgaagaagaagtgggtatatgatgctaaacgatcagttgtagct
ttaaaaagacatgaaataaatcttcaaggaatcgattttgatttattgcttgtatcatat
ctgcttaatccatctgaatctaccgatgattttgctggggtggcaaaacggcataattat
acagatgtagagacagatgaagctgtatatggtaaaggtgcgaagaagaaggtcgcggaa
ggtgacatacttgctgaacatttggcgcgtaaagcagtcggaattgcttcattatatgat
ccttgtttgcaggagttagagcaaaatgaacaaacagaattgttttatgaattagagcta
ccattggcactgattttggcgaagatggaatacactgggattaaagtagatgtacaaaga
ctgaaagaaatgaaaaaagaaataggggatcgtctagctgaaattgaagcaaaaatctat
cgccttgctggtgaaacattcaatattaattcacctaagcagctaggggttattttgttc
gaaaatctggggttgccggtaattaaaaaaacaaagaccggctattcaaccgccgcagat
gtgttagaaaaattggaaccggaacacgaaattattaaagaaatacttgattatcgtcag
cttggaaaattgcagtctacatatattgaaggcttgctaaaggtggttcatcaagagaca
gacaaagtgcatacccgctttaaccaagctttgacatctacgggtagacttagctccatt
gacccgaatttacagaatatcccgattcgcttagaggagggaaggaaaattcgtcaagct
ttcattccgtcacaagaagattgggtgttatttgcggcggattactcgcaaattgagcta
cgtgtcctcgcagatatcgccaaggatgaaaaattaatcgaagcatttacaaataatatg
gacattcacacaaaaacagcgatggatgtatttcatgttgccccggatgaagtgacatca
aatatgcgtagacaagcaaaagcagttaactttggtatcgtttatggcatcagcgattat
gggttatcgcaaagtctaggtatcacacgaaaagaagcgggccaatttattaatcgttat
ttggaaagctttcctggggtaaaagattatatggatgatattattgcggatgcaagagaa
aaaggatttgtggagacccttttgcatagaagacgttatattccagaaataacgagtcgg
aatttcaacttacggagttttgcagaaagaacggcgatgaatacaccgattcaaggaagt
gcggcagatatcatcaagaaggcaatgatcgatatggctgccagacttgaaaaagaaggg
ttacagacacgtctactacttcaggtacacgatgaattaatatttgaagcaccaaaagat
gagattgacattcttaaggaaattgttccagatgtaatggaacacgcactcaagctcaat
gttccgcttaaagtagaatattcttatggtgcttcatggtacgatgcgaaatag
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