Lederbergia lenta: NCTC4824_01405
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Entry
NCTC4824_01405 CDS
T06924
Symbol
mutM_1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
blen
Lederbergia lenta
Pathway
blen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4824_01405 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_01405 (mutM_1)
Enzymes [BR:
blen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC4824_01405 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC4824_01405 (mutM_1)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC4824_01405 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
zinc-ribbons_6
HscB_4_cys
Motif
Other DBs
NCBI-ProteinID:
SQI54982
UniProt:
A0A2X4W7S3
LinkDB
All DBs
Position
1:1434685..1435509
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AA seq
274 aa
AA seq
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MPELPEVEAVRKSLVELVVGKTIKDVFVGWPKIIKKPLEIEQFQDALQGQTILDINRRGK
FLIFVLDDYALVSHLRMEGNYSVRSHDDPEEKHTHIVFKFVDGTELRYRDVRKFGTMHLF
TKGMEHTELPLAKLGPEPFAAEFTQNYLKEKLMKTERMIKAVLLDQTIVTGLGNIYVDEV
LFRSSIHPERIAKTLSDEEVALLREQAAATLEESIQAGGSSVNTYMNSRGESGTYQERLL
VYGKKGEGCKKCGIPLQKIKVAGRGTHFCPECQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccggaggtggaagccgtccgcaagtctttggtggaacttgttgtaggg
aaaacaattaaagatgtctttgttggttggcctaaaattataaagaaaccattagaaatc
gaacagtttcaagatgctttacaaggtcaaacaattctcgatattaatcgaaggggtaag
tttttaatttttgtattagatgattatgcccttgtttcccatttacgtatggaaggtaat
tatagtgtaaggagtcacgatgatcctgaagaaaagcatacacatattgtatttaaattt
gttgatggcacagaattgcgatatcgcgatgtacgtaaatttggaacgatgcatttattt
acaaaaggaatggaacatacggagttaccactggcgaaattgggccctgaaccattcgct
gcagagtttacacaaaattatttaaaagaaaaattaatgaaaacagaaagaatgatcaag
gctgttctacttgatcaaacgattgtaacaggtcttggaaatatatatgttgatgaagtg
ctatttagatcaagcattcatcctgagcgtatagcaaaaacacttagtgatgaagaagtt
gctctattgcgcgaacaggctgcggcaacattagaagaatctatccaagctggcggtagt
tcagtgaacacatatatgaattcccgtggtgaaagtggaacgtatcaagaacgcctttta
gtatatggaaaaaaaggagaagggtgtaaaaaatgtggcatcccacttcaaaaaataaaa
gtagctggtagaggaacacatttttgtcctgaatgtcaaaaataa
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