Lederbergia lenta: NCTC4824_01552
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Entry
NCTC4824_01552 CDS
T06924
Symbol
cafA
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blen03019
]
NCTC4824_01552 (cafA)
03009 Ribosome biogenesis [BR:
blen03009
]
NCTC4824_01552 (cafA)
Messenger RNA biogenesis [BR:
blen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC4824_01552 (cafA)
Ribosome biogenesis [BR:
blen03009
]
Prokaryotic type
rRNA processing factors
NCTC4824_01552 (cafA)
SSDB
Ortholog
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GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Colicin_D
Motif
Other DBs
NCBI-ProteinID:
SQI55804
UniProt:
A0A2X4Z577
LinkDB
All DBs
Position
1:1588226..1589701
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AA seq
491 aa
AA seq
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MNEIIIDASVAEKRFAVKEDGLVTTLFIEQPTDRSDVGNIYLGRVESVRPGMNAAFINIG
TKKNGFLQKDQIPAFIHSTSETKNIKPISHFLKEGEKILVQIKKDETGTKGPLLTAIIEF
TSSNIVYMPEGKYISVSKKLEEEERNTWRNLIVKKRCGQEGFVIRTAVINSSEEEISQEI
AALRSEYMQLKTLANTRKAPAILVEMSNFTEELRHELSRLQSGTVFSNTRNVIEPLRLTN
SSNWSFQFHHQRENIFSKHQLETELEKAQRQMIYLDDGAYIVINETEAAVVIDVNTGKFT
GKQLAADTIRKTNLAASHEIARQLRIRDYGGIILVDFINMKSIRDRNKVQEIFVTALKTD
PKHIRVVGFTPLGIFELTRKRTKQSLSDTTQTECAVCRGSGKVDSPETIAFRLERELHGL
PRGEFEAVLVECDNITRSTFAGENNRDLKRIEESLHMKILFKVINNGKYEYYLRQFDTVE
NIQAKLTGENR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgaaattataattgatgcaagtgtagctgaaaaacgatttgcagtgaaggaggac
ggtttggtgactactttatttattgagcagccaacggaccgttcagatgtaggaaatata
tatttagggcgagtggaaagtgtaagacctggtatgaatgctgcgtttataaatattggg
actaaaaagaatggatttctacaaaaggatcagattccagcatttatccactctacaagt
gaaacaaagaatataaaacctatatctcattttctaaaagaaggcgagaaaatacttgta
caaataaaaaaagatgaaacaggaacaaaaggtccgttattaaccgctattattgaattt
acaagctcgaacatagtttatatgcctgaaggaaaatatatttccgtttctaaaaaattg
gaagaagaagaaagaaatacatggcggaatttaatcgtaaagaagagatgtggtcaagaa
ggtttcgttatccgaacagcagtgataaacagtagtgaagaggaaatttcacaggaaata
gctgcactacggagcgagtatatgcagttgaaaacattggctaacacaagaaaagctcct
gctatcttagtggaaatgtctaattttaccgaagaattaagacatgagttaagtcgctta
caatccggaactgttttctcaaacacacggaatgtaatcgagcctctgcgtttaacgaac
agctctaattggtcctttcaatttcatcatcaacgagagaatattttttccaaacatcaa
cttgaaaccgaacttgagaaagctcaaaggcaaatgatttatttggatgatggtgcatat
attgtgattaatgaaacagaagcggctgtcgttatcgatgtaaatacggggaaatttacc
ggaaagcaattggcggcagacacgattaggaaaacgaatcttgcggcctcgcacgaaatt
gcaagacaactgcggatcagggactatggtggcattatattagttgactttatcaatatg
aagtccataagagatagaaataaagtacaagaaatctttgtaacagcattaaaaacggat
cccaaacatattcgtgtggttggttttacgccgcttggcatttttgagttaactaggaaa
cggacaaaacagtcgctatcagataccacacagactgaatgtgctgtgtgcagagggtct
ggaaaagtggatagccctgaaacaatagcttttaggcttgaaagagaattacacggatta
ccaagaggggaatttgaagcagtgttagttgagtgtgataacataacaagatctactttt
gcaggggaaaataatcgagatttaaagagaatagaggaaagcctacatatgaaaatttta
ttcaaagtgattaataatgggaagtatgagtattatcttcgtcagtttgacacagtggaa
aatattcaggcaaaacttactggcgaaaaccgttga
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