Lederbergia lenta: NCTC4824_01835
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Entry
NCTC4824_01835 CDS
T06924
Symbol
sinR_2
Name
(GenBank) transcriptional regulator
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
blen03000
]
NCTC4824_01835 (sinR_2)
Transcription factors [BR:
blen03000
]
Prokaryotic type
Helix-turn-helix
XRE family
NCTC4824_01835 (sinR_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_26
HTH_31
SinI
HTH_25
MarR
Phage_CI_repr
HTH_37
Sigma70_r4
HTH_IclR
DUF896
HTH_24
HTH_35
MTR4-like_stalk
MarR_2
Motif
Other DBs
NCBI-ProteinID:
SQI56439
UniProt:
A0A2X4W190
LinkDB
All DBs
Position
1:1842215..1842553
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AA seq
112 aa
AA seq
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MIGKNICKIRKKKGLTITELANRAGIAKSYVSNIERDVNKNPSINVIEKIASVLEVDLKT
LIDPESANETKLPQLDAEWIDLVNELKESGIKKEEIKEFKTLLEFIKWQNKQ
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgatagggaaaaatatatgtaaaatacgaaaaaaaaagggactgacaataacagagctt
gcaaatcgggctggtatagccaaatcatatgtaagtaatattgaaagggatgtgaataag
aatccttctataaatgtgatagaaaaaatagcctctgttttagaagtagaccttaaaacg
ctaatagatccagaatcggctaacgaaaccaaactacctcagcttgatgcggaatggatt
gatcttgtaaatgaattaaaagaatcagggatcaaaaaagaagaaattaaagaatttaaa
acgttgcttgaatttattaagtggcaaaataaacagtag
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