Lederbergia lenta: NCTC4824_01881
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Entry
NCTC4824_01881 CDS
T06924
Symbol
recQ_1
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blen
Lederbergia lenta
Pathway
blen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC4824_01881 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blen03019
]
NCTC4824_01881 (recQ_1)
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_01881 (recQ_1)
Enzymes [BR:
blen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4824_01881 (recQ_1)
Messenger RNA biogenesis [BR:
blen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC4824_01881 (recQ_1)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC4824_01881 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
SQI56481
UniProt:
A0A2X4W056
LinkDB
All DBs
Position
1:1885466..1886929
Genome browser
AA seq
487 aa
AA seq
DB search
MNKYDVLKKMFGFSEFRTGQEEVIDAVLDKKNVLAMLPTGMGKSLCYQLPGYLLGGTVLI
ISPLISLMHDQVEQLRMMGERKAVALNSFLKSDEKRNVIRNLEEYRFLYVSPEMLRSLQV
REKLKKMNISLFVIDEAHCISQWGHDFRPDYLNLGHVRAEIGNPPALALTATAVKEVRED
IKEFLQLHHTDEFIYSVDRDNISILVEKTNSFFEKRKSLLRHATSLKKPGIIYFSSKRLA
EETADYLSDQGIGGVAAYHGGMDQEQRILIQQQFIHDQLNIICATSAFGMGINKENIRFI
IHFHMPSQMESYVQEIGRAGRDGEASIAILLYSPGDEHLHYQLMNYELPDDSHIESYVAM
IASNRKEELMSNVNMSETQTRFLEHHFTSIKNRVEMVDHIKNARDLRIDHKMKKLKQMKN
WLEELNCRRSHILALFGEDSKQPPNLCCDLCGFDITHYRDTTKQIDKQILSWEEILQQLL
LPATVNE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatatgatgtgttgaaaaagatgtttggtttttctgaatttagaacagggcaa
gaagaagtgatagacgctgttcttgataaaaaaaacgtcttagcgatgttaccaactgga
atgggaaaatccttatgttatcaattgccaggatatttacttgggggtacagtgcttatt
atttctccattaatatctttaatgcatgatcaggtggagcaactacgcatgatgggagag
cgtaaagcagtcgctttaaattcttttctcaaatcagatgagaaaagaaatgtaataaga
aacctggaagagtatagatttctgtatgtttcacctgaaatgcttcggtctttgcaagta
agagaaaaattaaagaagatgaatatctccctatttgtgattgatgaagcgcattgtata
tcccaatggggtcatgacttccggcctgattatttaaatctaggtcatgtgagagcagaa
attggaaatccacctgcattagcactaacagcaactgcagtgaaagaagttcgtgaagac
attaaagaattcttgcaacttcatcacaccgatgaatttatttattccgttgatagagat
aatatcagtatcctcgtagaaaaaacgaatagttttttcgaaaaaaggaaaagtttgtta
aggcatgcgacatctttaaaaaagccaggaatcatttatttttccagtaaacgccttgcg
gaggaaactgctgattatttaagtgaccagggaataggcggagttgcggcttatcacggt
ggaatggatcaagaacaacggatcttaatacaacagcaatttatacatgaccaattaaat
ataatttgtgcaacaagtgctttcggaatggggataaataaagaaaatattcgctttatc
attcatttccatatgcctagtcaaatggaatcttatgtgcaggagatcggtagagctggc
agggatggggaagccagtatagcaattttactttatagtcctggtgatgaacacttacat
taccaattaatgaattatgagcttcctgacgatagccatatagaatcgtatgttgctatg
atcgcttctaatagaaaagaagaattaatgtcaaatgtaaatatgagcgaaacacaaaca
cgctttttagaacatcattttacatctataaaaaatcgagtagagatggtagatcatatt
aaaaatgcaagagatctacgtattgatcataaaatgaaaaaattgaagcaaatgaaaaat
tggttggaagaattaaattgtagacgaagtcatatattagctttatttggggaagacagt
aaacaaccacctaatttatgttgtgatctatgtggatttgatattacacattatcgagat
acaaccaaacaaatagataaacaaatattgtcttgggaagaaattcttcagcaattgctg
ttgccggctactgtaaatgaataa
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