Lederbergia lenta: NCTC4824_02121
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Entry
NCTC4824_02121 CDS
T06924
Symbol
nfo_2
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
blen
Lederbergia lenta
Pathway
blen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4824_02121 (nfo_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_02121 (nfo_2)
Enzymes [BR:
blen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NCTC4824_02121 (nfo_2)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC4824_02121 (nfo_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2865
Motif
Other DBs
NCBI-ProteinID:
SQI57640
UniProt:
A0A2X4WJ93
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All DBs
Position
1:2116422..2117270
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AA seq
282 aa
AA seq
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MKFGCHTSIREGYLGAAMQAFRMNAAAFQYFPKNPKSLAVKNFSHEDAMQCKAFCEEKSL
MSVSHSPYPTSLTPQNKKKRELVIRSLLNDLDIAEACGSIGVVVHFGKQISHTDPIASYQ
LVIDMLNEILQRWDGNAKLLLENNAGLPGAIGTTLEELVQIRKLCTYHEKIGFCFDTCHA
FSCGLWDGDNWDSVLSKGMELDYFGALKLIHFNNSKYETRVGKDRHAPIFGPGYITEDQF
DQLVQTPQLANIPFILETPKEEMPHQKEIELLQKKWGNASGW
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggttgccatacttctattagagagggttatttaggagctgcaatgcaagcg
ttccgaatgaatgctgcagcttttcaatatttccctaaaaatccaaaaagtttagcagtg
aaaaattttagtcatgaagatgcaatgcaatgcaaggcattttgcgaagaaaagtcgctt
atgtctgtcagccattcgccttatccaactagtttgacgccccaaaataagaaaaaacgc
gaattagtaattcgttcattgttaaatgatttagatatcgccgaggcatgtggctctatt
ggtgtagttgtgcattttggcaaacagattagtcatacagatcccattgcaagctaccaa
cttgtcattgatatgctgaatgaaattcttcaaagatgggacggaaatgcaaagctatta
cttgaaaataatgcaggtttgcccggagcgattggaacaaccttggaagaattagttcaa
atacgcaaattatgcacttatcatgaaaaaataggattttgttttgatacctgccatgca
ttctcttgcggcttatgggatggtgataattgggatagcgtgctaagtaaaggcatggaa
cttgactattttggagcattaaagctgattcattttaataattcgaagtatgaaacacgt
gtaggaaaggatcgacatgctcctatttttgggccaggatacattacggaggatcaattt
gaccagttagtacaaacgcctcagcttgcaaacattccttttatattggaaacaccaaaa
gaagaaatgccacatcaaaaggagatagagctactgcagaaaaaatgggggaatgcttcg
ggatggtga
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