Lederbergia lenta: NCTC4824_02414
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Entry
NCTC4824_02414 CDS
T06924
Symbol
sbcC
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_02414 (sbcC)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC4824_02414 (sbcC)
Archaeal homologous recombinant proteins
NCTC4824_02414 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
DUF7340
SMC_N
Motif
Other DBs
NCBI-ProteinID:
SQI59580
UniProt:
A0A2X4WPJ2
LinkDB
All DBs
Position
1:complement(2393149..2396283)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKPIKLTMQAFGPYAGKEVIDFSQLGNRTMFVISGKTGAGKTTIFDGISFAIYGRASGEG
RMGPDLRSQFAEDDLLTEVSLEFSLRNQVYYICRSPQQEKKKARGDGYTTVNAKAEMYML
DEDGTQKLIAANVRETDEKIKEIIQLDANQFRQILMIPQGDFRKLLTSDSRDKEVILQRL
FHTELYKQIEDKLREKASLLKKEVELGMTERTRLLKGISTNKNTHLELELEEEILNVTAV
LSLLEEVQKTLQSDVNEFTKKMNEQKIVRDEAKRKADAAEDVMKQMAIREQLSHKHNELK
AREKEIEEMKSSVELAHKAANLQHQEQLCQRLKKELDSYKARLETDMNHYNEEKKKLDMS
EARLRKEEEKQEQRDQLDNDLSRLINMREDVYSFSQKQAELEQIQVKKEDYQKSILHVKE
NLSQLKDRSEKQRKLLKDFEQAQMLAFQNENKLSQVESVKKQLLTVSTALKKKTDLHSEF
KLKTKLFEKAKEISEDAHRTLEKIEDSWLKGQAGHLAQHLEDGKACPVCGSNHHPDLARV
TESDQSADDVKIAKLAVSKSDQELLEAERSWMKVKTESEFHQENTQKLVDDLTQLVPGFT
IENMDMFIQDYEKKHKETAQFLLEANAKVQKIPELNAQISTCEVELEKQNNKLNDMLDVE
KQLSIQYTGAATIIHTLSSKIPENMRGKEQFDKEVVKLEKEKRVLQEALDTARRDHVMIS
ENLARLSGTITNLEIHMKEKEKAMDIERNNFLNQLEKEAFETYKVYHAAKLEPIEIKKIE
NAIRAYYEEYRSISDRLKDYEERLQGMEKPDLNLLKKSLEKAEQYLTLLGDQHAHLIMQV
KRNEEIAHMVKNINEEMKALEEEYDLVGHLSDITRGQNTYRLTFERFVLASFLDGILEAA
NSRLTKMTSGRYQLLRKTDRSKGNVQSGLELLIFDQYTGQDRHVKTLSGGESFKAALSLA
LGLADIVQQHAGGVSLETMFIDEGFGTLDPESLDHAIEALMDIQSSGRLVGIISHVPELK
ERIDARLEVTANQYGSKTAFHFTG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccataaaattgacgatgcaagcattcgggccatacgcaggtaaagaagtaatc
gacttttcgcaactcggtaatagaacaatgttcgttatttccggaaaaactggtgccgga
aaaacgacgatctttgatggaattagttttgctatttatggaagggctagtggagaaggt
agaatggggccagatttgcgcagtcaatttgcggaggatgatttattgacggaagtatca
ctggaattttctctacggaatcaggtttattatatatgtcggtctccgcagcaggagaaa
aagaaagcacgtggggatggctatacaacggtcaatgcaaaagcggaaatgtatatgctt
gatgaagatggaacgcaaaagttaattgcggcgaatgtaagggaaacggatgaaaagatt
aaagaaatcatccagcttgatgctaaccaattcaggcaaattttaatgattccccaaggg
gactttagaaaattgcttacatcagatagtagagataaagaagtaatcctccaacgttta
ttccatacggagttgtataagcaaattgaagacaaattgagggaaaaggctagtttgtta
aaaaaagaagtagagcttggaatgacagaaagaactcgacttctaaaaggaatctctacc
aataaaaatacacacttagaattggaattagaggaagaaatattaaatgtgacagctgtg
ttatctctgttagaggaagtccaaaaaacattacagtcagatgtaaatgaatttactaag
aaaatgaacgaacagaaaatagtccgagatgaagcaaagcgtaaagcagatgccgcagaa
gatgtgatgaagcaaatggccattcgcgagcaattatctcacaaacacaatgagttaaag
gcgagagaaaaagaaatagaggaaatgaaatccagcgttgagctagcccataaagcagcc
aatttgcaacatcaagaacagctatgtcaacgtttaaaaaaagagttagatagctataag
gctagacttgaaacagatatgaatcactataatgaagaaaagaaaaagttagatatgtct
gaagctcggttgcggaaagaagaggaaaaacaagaacaaagagatcaattagataatgac
ctctcaagactcattaatatgcgtgaagatgtgtattcattttcgcaaaaacaagcagaa
cttgaacagattcaagtgaaaaaagaagattatcaaaagagtattcttcatgtaaaagag
aacttatctcagttgaaagatagatctgaaaagcaaagaaagttattgaaagactttgaa
caagctcaaatgttggcttttcaaaatgaaaataaattgagtcaagtggaatccgtgaag
aaacaattacttacagtatcgacagctttgaaaaagaaaacagatttacatagtgaattt
aaattaaaaacgaagttatttgaaaaggcaaaagaaatatcagaggatgctcacagaacg
ctggaaaaaatagaagatagttggcttaaaggacaagcaggtcatttagcgcaacatctc
gaagacgggaaagcatgtccagtttgtggctcaaaccatcatccagatttggctagggta
acagagtcagatcaatcagccgatgatgtcaaaatagcgaaactcgcagtatccaaaagt
gaccaagaattgttggaagcggaacgttcatggatgaaggtaaaaacagaatcggaattt
catcaagagaatactcagaagcttgtagacgacttaactcaattggtcccgggatttaca
attgaaaatatggatatgtttatccaagattatgaaaagaaacataaagaaacagcacag
tttttgttagaggcaaacgccaaagtgcagaaaatccctgaattgaatgcgcaaatttct
acatgtgaagtggagctggaaaagcagaataataagctaaatgatatgttagatgttgaa
aagcaattatccattcaatatacaggagcggcaaccattatccacacgcttagtagtaaa
atccccgaaaatatgaggggaaaagaacagtttgataaagaggtcgtaaaattagaaaaa
gagaagcgggtattacaagaagctttagatacagcgagaagagatcatgtaatgattagt
gagaacttagcgagattgtcgggaaccataaccaatttagaaattcatatgaaagaaaaa
gaaaaagcgatggatattgaacgtaataactttttaaatcaacttgaaaaggaagcattt
gaaacttataaagtgtatcatgcagcaaaattagagccgatagaaattaaaaaaatagaa
aatgcgattcgtgcctattatgaagaatatagatccatttccgataggcttaaagattat
gaagaaagattgcaagggatggaaaagccagatcttaatctattaaagaagtctttggaa
aaggcagaacaatatttaactttattgggcgatcaacatgcgcatttgattatgcaggtt
aagcggaacgaagaaatagcccatatggttaaaaatataaatgaggaaatgaaggcttta
gaggaagaatatgatttagttggccatttatcagatattacccgtggtcaaaatacgtat
agactgacatttgaaagatttgtccttgcatcatttctagatggtattttagaagcagct
aactcgagattgacaaaaatgactagtgggcgctatcaactactaagaaaaacggatcgt
tcaaaaggaaatgtacaaagtggtcttgaactgcttatttttgatcaatatactggtcaa
gatcgacatgtaaaaacactttccgggggcgaaagttttaaagcggcgctttcattagca
ttaggtttggcagacatcgtgcaacaacatgcagggggagtttccctagaaacaatgttc
attgatgaagggtttggcacgttagatcctgaatctttagatcacgcaattgaagcatta
atggatattcaaagcagtggacgacttgttggaatcatttctcatgtcccggaattaaag
gaaagaattgatgcccgtctggaagtaacagcaaaccaatatggcagtaaaaccgcgttt
cattttacaggttaa
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