Lederbergia lenta: NCTC4824_02679
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Entry
NCTC4824_02679 CDS
T06924
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blen03032
]
NCTC4824_02679 (topA)
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_02679 (topA)
Enzymes [BR:
blen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC4824_02679 (topA)
DNA replication proteins [BR:
blen03032
]
Prokaryotic type
DNA Topoisomerases
NCTC4824_02679 (topA)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC4824_02679 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
SQI60245
UniProt:
A0A2X4Z7H1
LinkDB
All DBs
Position
1:complement(2658230..2660305)
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDVEQNFEPKYITIRGK
GPVMKELRTAAKKAKKIFLAADPDREGEAIAWHLANSLDVDIHSNCRVVFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVALRLVIDREN
EIKNFIPEEYWSIDGEFKKDKNDFQAGFYGLKGKKTKLSSEADVNSVMDKLSDDVFKVVS
VVKKERKRNPALPFTTSSLQQEAARKLNFRARKTMMLAQQLYEGMDIGKEGTVGLITYMR
TDSTRISEVAQEEAAEFISSKYGSEYLKSDKPKAKKKGKTQDAHEAVRPTSTLREPSSVK
AFLSRDQLRLYKLIWERFIASQMAPAVMDTMAVDLQNGEVIFRANGSKVKFSGFMKVYVE
GSDDQLEEKENFLPDLVEGDEVIADKISPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALENKRFIPTELGEIVLELIMEFFPEVINVEFTVKMESELDEIEEGK
IAWVSIIDEFYKGFEVNLKKAEIEMREVEIEDEYAGEDCDLCGNPMIIKMGRYGKFMACS
NFPECRNTKAIVKQIGVKCPTCKQGEIIERKSKKKRIFYGCDRYPECEFISWDKPIERPC
PKCSSTLVEKKLKKGIQVQCTSCDYKELSQQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattacttagtaattgtagaatcgccagctaaggcaaaaacaatagaacgttat
ttaggaaaaaaatataaagtaaaggcatccatgggccatgtgcgtgatttaccaaagagt
caaatgggagtagatgttgaacaaaactttgaacccaaatatattacaatcagaggcaaa
ggtccagtaatgaaagaattaaggactgcagctaaaaaagcgaaaaagatttttctcgca
gctgacccggatcgtgaaggggaagcgatagcatggcatttagcaaatagtcttgatgtg
gatatccattctaattgccgagtagttttcaatgaaattacaaaagatgcaattaaagag
tcgtttaaacatccgaggccaattaatatggaccttgttgatgcacagcaagcaagacgt
attcttgataggcttgtaggttacaatattagcccattactatggaagaaagtgaagaag
ggtttgagtgcaggccgtgtacaatcagtagcgcttcgattagtaatcgatcgagaaaac
gaaataaagaattttatacctgaggaatattggtccattgatggagaatttaaaaaagac
aaaaatgattttcaagccggtttttatggtttaaaaggaaaaaaaacaaagctaagttcg
gaagcggacgttaattcagtaatggataagctttcagatgatgtatttaaagttgtctcc
gttgtgaaaaaagaaagaaaaagaaatccagctctaccatttactacatcatctttacaa
caggaagcggctaggaagttaaactttcgggcaagaaaaacaatgatgcttgctcaacag
ctttatgaaggaatggacataggtaaagaaggtactgtcggtttgattacgtatatgcgt
acagattctactagaatttccgaggtagctcaagaggaagccgcagaatttatttcctct
aaatatggcagtgagtatttaaaatccgataaaccaaaagcgaagaaaaaaggaaaaacc
caagatgcgcatgaagctgtgagacctacaagcacattgcgtgaaccaagctctgttaag
gcatttttaagtagagaccaattaagattatataagcttatttgggaaagatttattgca
agtcaaatggcacccgctgtaatggatacgatggctgtagatttacagaatggtgaagta
atttttcgagcgaatgggtcaaaggttaaattttctggttttatgaaagtatatgtagaa
ggttccgacgatcaattagaagaaaaagaaaactttctaccggatttggttgaaggagac
gaagtaattgctgacaaaatcagtccaaaacagcatttcactcagccgcctccaaggtat
acggaagctagacttgttaaaacccttgaagaacttgggataggaagaccatcgacatac
gccccaacacttgatacgattcaaaaacgaggttatgtggcgttagaaaataaacgcttc
atacctacagagcttggtgaaattgtattagagctcataatggaattttttccggaagtg
attaacgtcgagtttacagtaaaaatggaaagtgaactagatgaaattgaagaaggaaag
attgcgtgggtttcgattatagatgaattttataaaggattcgaggttaatttaaaaaaa
gctgagattgaaatgcgcgaagtagaaattgaagatgagtacgcaggagaagattgtgat
ctttgtggtaatccgatgattattaaaatgggtcgctatggtaaattcatggcatgcagc
aacttccctgaatgtagaaatacgaaagcgattgtgaaacaaattggagtaaagtgtcca
acttgtaaacaaggagaaattattgagcggaaaagtaagaaaaaacgaatcttttatggc
tgtgatcgctacccagaatgcgaatttatttcatgggataagccgattgaacggccgtgt
cctaagtgtagtagcacacttgtggagaaaaaacttaaaaaaggaattcaagttcaatgt
acgagttgtgattataaagagttgtctcagcagtaa
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