Lederbergia lenta: NCTC4824_03005
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Entry
NCTC4824_03005 CDS
T06924
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
blen
Lederbergia lenta
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blen03400
]
NCTC4824_03005 (addB)
Enzymes [BR:
blen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4824_03005 (addB)
DNA repair and recombination proteins [BR:
blen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC4824_03005 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DEAD
LAGLIDADG_3
Motif
Other DBs
NCBI-ProteinID:
SQI60939
UniProt:
A0A2X4WDW9
LinkDB
All DBs
Position
1:complement(2994291..2997785)
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AA seq
1164 aa
AA seq
DB search
MSLRFVIGRSGSGKTTMFLNEIKDRLIEEPQGPPVLYIVPEQMTFLSEYRLINTSGMSGM
IRTQVFSFTRLAWRILQETGGASRAHLSSTGLNMLIRKIIEDNKEDLKLFKQAADKVGFI
QQVEAMLTEFKHYCVEPEQLNLKQKELAFGVSTRALADKIHDLELIYSKFEEALFGKYVD
SNDYLNLLAESIDKSDYLKNAEIYIDGFHSFAPQEYMVIEQLMKKCSRVSIGLVLDRPFK
NGVMPDELHLFRMTGETYSTLYEMARQNAITLEDDQFLASSLRFKDESLLHLERYFDKRP
IKVFQGKPAMEIRMAANRRAEMEGTAREIRRLVMEEGYRYQDIAVLMRNGSDYKETLETV
FHDSDIPYFVDQKRSMLNHPLIELIRSSLEAISSNWRYEPVFRAVKTDLLFPFKMNPEQL
REQMDRLENYVLSHGIKGSKWTDKQPWRYRRYQGLELAATVQTDAEREIEEDINEARNII
ALPLMRLSKRLRKAQTGRELCEAVYSLLEELDIPSKLEERSNIAEERGQLVVSREHDQAW
GTVIELLDQFVEILGDERIPVQKFISILDSGFEAMKFSLIPPAIDQVFVADLELSRLSHI
KASFVIGLNDGVIPAKQANDGVLSDEDRAELITGGLGLAPGSKKRLLDEDFVAYRAMTIS
AEKLYLSWPIANDEGKALLASPYIKRIKEMFPEVREFSIENEPGELAQEQQLAYISHPDT
AIAYLTTQMQLKKRSYPMADFWWDVYNFYMESPKWRIKTQRVLSSLFFQNETKHLTERTS
KELYGNEILASVSRMELFQSCAFSHFISHGLKLRERDIFRLEAPHIGDLFHGALKWIAEE
INNRNLTWANLTKKECEWLAQEAVAYLAPRLQNQILLSSNRYYYIKRKLEQVIGRASHVL
SSHAKSSGFSPIGIELAFGPHKELPPFAFTLENGTKMQLQGRIDRVDKAEDENGVYLRVI
DYKSSARGLDLNEVYNGLALQMLTYLDIIITHSKELVGVEASPAGVLYFHLHNPMVDSNK
IMTLDDIEKEILKKFKMKGLLAGNPEIVKLMDTSLETGSSHIVTASINKDGSLSSRSKEN
AASEEDFNVLKRYVRNLYQKSGNRIVSGDVSIDPYKLQDRTPCQFCAYRSVCQFDQSLEE
NNYRNIQPQKSSEALARMREEVGR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgctttgtgatcggtcgatctggatctggaaaaacaacgatgtttttaaat
gaaataaaagatagattaattgaagagccacaaggaccaccagttctctatattgtgcct
gaacaaatgacatttttatctgaatatcgcttgatcaatacatcaggcatgagtggaatg
attcgcacacaagtatttagctttactcgtcttgcttggaggattttgcaagaaacaggt
ggggcaagtcgtgcacacttgtccagcactggactgaatatgcttattaggaaaattatt
gaagataataaagaagatcttaagctctttaaacaggcagcagataaagtgggctttatt
caacaagtggaagccatgttaacggaatttaagcattattgtgtggagccggagcaactt
aatttaaagcaaaaggaacttgctttcggagtttcaactagggcgttagctgataaaata
catgatttagaattaatttatagtaaatttgaagaagcgctattcggtaaatatgttgac
tcgaatgattatttaaatctgcttgcagaatcaattgataaatctgattatctaaagaac
gctgaaatttatatcgatgggtttcacagttttgcacctcaggaatatatggtaattgag
cagttgatgaaaaagtgtagtcgagtctcaatcggactcgtgcttgatcgaccatttaaa
aatggtgtaatgccagatgaattacatttatttcgtatgacaggtgaaacgtattctact
ttatatgagatggctcgacaaaacgcgataacccttgaggatgatcaatttttagcatca
tcactgcggtttaaggatgaaagtctattgcatctcgaaaggtattttgataagcgacca
attaaggtatttcaagggaaaccagcgatggaaattcggatggcggcgaatcgccgagct
gaaatggaaggaactgcacgagaaatacgtaggctcgtaatggaagaggggtacagatat
caagatattgcagtattgatgcggaatggaagtgactacaaagaaacactggaaacagtt
ttccatgattctgatattccttatttcgtggatcaaaaacgatcgatgcttaaccacccg
ctaattgaactaattcgttcttcacttgaagcgatcagcagtaattggcgatatgaacca
gttttccgcgctgtgaaaacagatttacttttcccttttaaaatgaatccagaacagctg
agagagcaaatggacagacttgaaaactatgttttatcccacggaataaaaggaagtaaa
tggacggataaacagccatggcgttacagaagatatcagggattagaattagctgctact
gtgcagacggacgcggagcgcgaaatagaagaggatataaatgaagctagaaatatcatt
gccctacccttgatgcgtttatcgaaacgtttgagaaaagcgcaaactggccgagaactc
tgcgaagctgtatattccttactcgaggaacttgatatcccgagtaaactggaagagcgg
agcaatattgctgaagaacgaggacaattagttgtatcaagagaacatgaccaagcatgg
ggcacggttattgaactattagatcaatttgttgaaattcttggagacgaaaggattcct
gtgcaaaaatttatctccattctcgattcgggcttcgaggcaatgaaattttctttgatc
cccccggctattgaccaagtcttcgttgctgatctggaactatcgcgtctttctcatatt
aaagcatcttttgttatagggttgaacgatggtgtaattcctgcgaaacaagcaaatgat
ggagttttatctgatgaggatcgtgccgaactgatcacgggtggtctgggacttgctccg
ggaagtaaaaaacgtttactggatgaggattttgtcgcctatagggcgatgactatatca
gctgagaaactatatctttcctggccaatcgctaatgacgaaggaaaagcactactcgct
tccccttatataaagagaataaaagagatgttcccggaagtaagggaattttcaatagaa
aatgaacctggagagctagcacaggaacaacaacttgcttatatttcacatccggatacg
gcaattgcctatctgacaactcaaatgcagttaaaaaagcgaagttaccctatggctgat
ttttggtgggatgtgtataacttttatatggaatctcctaagtggagaattaaaacacag
agggtcctttccagtttgttctttcaaaatgaaacaaagcacttaacggaacgaacgagt
aaagagttatacggtaatgaaattttggcaagcgtatcgagaatggaacttttccaaagt
tgcgctttttcccattttatttcgcatggattaaagcttcgtgaacgtgatatattccga
ttagaagcaccacatattggagatttatttcatggtgcattgaaatggatagcggaagaa
attaataacagaaacttaacctgggctaatttgacaaagaaagagtgtgaatggttggca
caagaagcagtggcatatcttgcaccaaggctacaaaatcaaattttattaagctccaat
cgatactactatattaaaagaaagctagaacaagtaattgggagagcttcacatgtatta
agcagccatgctaaatcaagcggtttttctcctatcggtattgaacttgcctttggtccg
cataaagaattgccaccttttgctttcactttagaaaatggtacgaaaatgcaactacaa
ggtaggatagacagagtagataaggcagaagatgaaaacggagtatatttacgggtgatt
gactataaatcaagcgctagagggctggatttaaacgaagtatacaatggactagctttg
caaatgctcacatatttagacattattattacacattctaaagaattggttggtgtggaa
gcttcgcctgcaggtgtgctttattttcatttgcataatccaatggtagatagtaataaa
ataatgacgcttgatgacattgaaaaggaaattttaaagaaatttaaaatgaagggactg
ttagctggtaatccggaaatagttaaactaatggacacctccctagagacaggaagttcc
catattgtaacagctagcatcaataaagatggtagcctatcatctagatcaaaagaaaat
gcagcaagtgaagaagattttaatgtattaaagcgatatgtaagaaatttgtaccaaaaa
tctggtaatagaattgtttcaggggacgtgagtattgatccgtataaattacaagaccga
acgccatgccagttttgtgcgtatcgttctgtttgtcaatttgatcagtcattagaagaa
aataattaccgaaatattcaaccgcaaaaatcatctgaggcattagcgagaatgagggag
gaggtaggacgatga
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