Lederbergia lenta: NCTC4824_03880
Help
Entry
NCTC4824_03880 CDS
T06924
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
blen
Lederbergia lenta
Pathway
blen00260
Glycine, serine and threonine metabolism
blen00460
Cyanoamino acid metabolism
blen00630
Glyoxylate and dicarboxylate metabolism
blen00670
One carbon pool by folate
blen00680
Methane metabolism
blen01100
Metabolic pathways
blen01110
Biosynthesis of secondary metabolites
blen01120
Microbial metabolism in diverse environments
blen01200
Carbon metabolism
blen01230
Biosynthesis of amino acids
blen01240
Biosynthesis of cofactors
blen04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
blen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCTC4824_03880 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NCTC4824_03880 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCTC4824_03880 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCTC4824_03880 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCTC4824_03880 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCTC4824_03880 (glyA)
Enzymes [BR:
blen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCTC4824_03880 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
PEX14-like_2nd
Motif
Other DBs
NCBI-ProteinID:
SQI63049
UniProt:
A0A2X4WJI2
LinkDB
All DBs
Position
1:complement(3910116..3911351)
Genome browser
AA seq
411 aa
AA seq
DB search
MSKIAQQDPQVYEAIQNELKRQRTKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEHVDVVEDLARDRAKEIFGAEHVNVQPHSGAQANMAVYFTILEQGDTVLGMNLSHG
GHLTHGSPVNFSGVQYNFVAYGVDEENQRIDYEDVRQKALEHKPKLIVAGASAYSREIDF
KKFREIADEVGAYFMVDMAHIAGLVAVGLHSNPVPHAHFVTTTTHKTLRGPRGGMVLCKA
EFGKKIDSAVFPGLQGGPLMHVIAGKAIAFKEALTPEYKTYIENVVANAKRLGESLEKEG
FNIVSGGTDNHLVLLDLRPFGLTGKVAEKVLDDVGITVNKNTIPFDPEGPFTTSGIRIGT
PAVTSRGFGLEEMDEIASLIGFILKNREDEAKLDEARNRIETLTAKFALYE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattgcacaacaagatccacaagtatatgaagcaattcaaaatgaattgaaa
cgccaacggacgaaaattgaattgattgcatcagaaaactttgttagtgaagctgtaatg
gaagcacaaggttctgtattgacgaacaagtatgcagaaggatatccaggacgacgctat
tatggtggttgtgagcatgtggatgtagtggaagatctagcgcgtgaccgagcgaaagaa
attttcggagcagaacatgtcaacgtgcagcctcattccggtgctcaagcaaatatggca
gtatactttactattcttgaacaaggtgacacagtacttggcatgaacttatctcatggt
ggtcatttgacacatggtagtccagttaacttcagtggcgtacaatacaattttgttgct
tacggagtagatgaggaaaaccaaagaatcgattatgaagatgttcgccaaaaagcgctt
gaacataaaccgaaattaattgttgcaggtgcaagtgcatattcacgcgaaattgatttt
aagaaattccgtgaaattgcagatgaggttggagcttactttatggttgatatggctcat
attgcaggacttgttgctgtaggtcttcattctaatccagtcccacacgcacatttcgtt
acgacaactacacataaaacattgcgtggaccacgcggcggtatggttctttgtaaggcg
gaattcggaaagaaaatcgacagtgctgtattcccgggtttacaaggtggtcctttaatg
catgtaattgcggggaaagcaattgcgtttaaagaagcattgactcctgaatataaaaca
tacatcgaaaacgttgtcgctaatgcaaaacgtttaggtgaatctttagaaaaagaagga
ttcaatatcgtttctggtggaactgacaatcacttagtgttacttgacctgcgcccattt
ggattaacaggaaaagtagcagaaaaggtgcttgacgatgtaggaattacagttaataaa
aatacaattccattcgatccggaaggtccatttacaacaagtggtattcgaattggtaca
ccagcggtaacttcacgcggatttggcttagaagaaatggatgaaattgcctcgttaatt
ggcttcattttgaaaaaccgtgaagacgaagcaaaactagacgaagcacgcaatcgcatt
gaaacactaacagcaaaatttgcattgtatgaataa
DBGET
integrated database retrieval system