Beggiatoa leptomitoformis: AL038_03635
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Entry
AL038_03635 CDS
T04090
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL038_03635 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
blep03000
]
AL038_03635 (nifA)
Transcription factors [BR:
blep03000
]
Prokaryotic type
Helix-turn-helix
Other families
AL038_03635 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_2
AAA_5
AAA
GAF_3
Mg_chelatase
AAA_16
AAA_3
Parvo_NS1
AAA_7
nSTAND3
Ufd2P_core
HTH_23
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ALG66973
UniProt:
A0A2N9YB10
LinkDB
All DBs
Position
complement(858622..860196)
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AA seq
524 aa
AA seq
DB search
MDSKNDQDVTLLNNRANLIESELEALFQVGKVLSRSLNLEETLEEVLKHLHHYAGMQYGV
VTLRTDDGELSVNAVYAGDKQQPPKFRYRVGEGIIGSVMQLNKTIVVERAGDDARFLDRL
GLYERHLPFIGIPIHINQELVGVLAAQPCTHDRLLHERTRFMEMVAQLIAQSVRFANEIA
RERRDLTDERDRLRQTVRGQYTFDNVVGHSPTMQRVFEMVRQVAKWNTTVLIRGESGTGK
ELIANAIHYNSPRHTAAFIKVNCAALPENLLESELFGHEKGAFSGAINQHKGRFERADGG
TLFLDEIGEISPTFQAKLLRVLQEGELERIGGTRTIKVDVRVIAATNVNLEDAVENNEFR
EDLYYRLNVMPIRLPPMRERIEDIPELAHFLIAKIAKMQGRKLELTDSAIRLLMRHDWPG
NVRELENCLERAAIMCEGDLIDRSIISMTGLEEKLTMPVVTNDNNANALTKVDLNDESID
ERERVIAALEQAGWVQAKAARLLNMTPRQIAYRIQTLNIKLRNI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtggattcaaaaaacgatcaagacgtaaccttattaaacaaccgtgctaacctaatcgaa
tctgagctagaagccttgttccaagtgggcaaggtgttaagccgttccctcaacctagaa
gaaacgctagaagaagtactcaagcatctacaccattatgcagggatgcagtatggggta
gtcacactgcgtactgatgacggggagttgtctgtcaatgccgtttatgcgggtgacaaa
caacaaccccctaaattccgctatcgcgtgggggaagggattattggctcagtgatgcaa
ctcaacaaaaccatcgttgttgaacgagcgggcgacgatgctcgttttttagaccgtttg
gggttgtatgaacggcatctcccttttataggcataccgattcacattaaccaagagcta
gtcggtgtacttgccgcccagccctgtacgcacgaccgtctcctacatgagcgcacgcgc
tttatggagatggtcgcgcagctcatcgctcaaagtgtccgttttgccaatgaaatcgcc
cgagaacgtcgtgacctcactgacgagcgcgaccgtttgcgccagactgtgcgtggacaa
tatacctttgataatgtagttggacattcgccaaccatgcaacgggtatttgaaatggta
cgccaagttgctaaatggaacacaaccgttttaattcgtggtgaatcgggtacagggaaa
gagctgatagccaacgcaattcattacaactccccacgccataccgctgcgtttattaaa
gtcaactgtgccgcacttccagaaaaccttttagaatctgagttatttgggcatgaaaag
ggggcatttagtggcgcgattaaccaacataaagggcgttttgaacgagcagatggcgga
acactgtttttagacgaaattggcgaaatttccccaacttttcaagcaaaattattgcgg
gttttacaagaaggtgaattagaacgcatcggggggacacgcacgataaaggttgatgtg
cgggtgattgcggcaacaaatgttaatttagaagatgcggtagaaaataacgagtttcgc
gaagacttatactatcgtctcaatgtcatgcctattcgcctgccacctatgcgtgagcgg
attgaagacattcctgaattggctcattttctgattgccaaaattgccaaaatgcaagga
cgtaagctggagttaaccgatagtgctatccgtttgctcatgcgtcatgattggccgggt
aatgttcgtgagttggagaactgtttagaacgagcggcaattatgtgtgaaggtgattta
atcgaccgttcaattatcagcatgacgggtttggaagaaaagctcaccatgcccgtcgtg
actaacgataataatgctaatgctttgacaaaggttgatttaaatgatgaatcaattgat
gagcgtgaacgggtgattgctgctttagaacaagctggttgggtacaagcaaaagctgcg
cgtttactcaatatgaccccgcgccaaattgcctatcgtattcaaaccttaaatattaaa
ttgcgtaatatttaa
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