Beggiatoa leptomitoformis: AL038_04290
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Entry
AL038_04290 CDS
T04090
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep03030
DNA replication
blep03430
Mismatch repair
blep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL038_04290
03430 Mismatch repair
AL038_04290
03440 Homologous recombination
AL038_04290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blep03032
]
AL038_04290
03400 DNA repair and recombination proteins [BR:
blep03400
]
AL038_04290
Enzymes [BR:
blep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL038_04290
DNA replication proteins [BR:
blep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL038_04290
DNA repair and recombination proteins [BR:
blep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL038_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNApol_Exo
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALG67074
LinkDB
All DBs
Position
complement(1024994..1025647)
Genome browser
AA seq
217 aa
AA seq
DB search
MCSATNMRPLQIDATYLERMVITEKTRFVVIDTETTGLLPYSGDEVVSISLIEMRGLEFT
GREYKTLVNPGRMIPIMSTALHRITNEDVANSPYLDDIMDDIIEFIGDAIIVGHHVNFDL
CFLNKALQKKLVWQLPNLWIDTMLLYVAYSGHLGHYSLDEVAKSFQIKNPARHTAWGDAF
VTGQIFQCITKQLLSNTSLASELIDLQYKVMTSFWKV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgtgttcagcaaccaatatgcgtcctttacaaattgacgcaacttatctggagcgaatg
gtcatcacggagaaaacccgttttgtggtcattgatacagaaacaacggggttgttgccg
tattcaggcgatgaagtcgtgtctattagtcttattgaaatgcggggtttagaatttacg
ggacgtgagtataaaaccttagtcaatcccggtcgtatgattcctattatgtccaccgca
ttgcaccgaattacgaatgaagatgttgcaaatagcccctatcttgatgatattatggat
gatattattgagttcattggtgatgccattatagtcggacatcatgttaattttgattta
tgctttttaaataaagcgttgcaaaaaaaactggtttggcaattgcccaatttatggatt
gatacaatgttgctctatgttgcctatagcggacatttaggacattacagtcttgatgag
gttgcaaagtcgttccagattaaaaatcccgctcgccacacggcatggggtgacgcattt
gtaacaggacaaattttccaatgtatcaccaaacaattactgtcaaatacgagtcttgca
tcagaattaattgatttacaatataaagtaatgacgagtttttggaaagtataa
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