Beggiatoa leptomitoformis: AL038_04440
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Entry
AL038_04440 CDS
T04090
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
blep
Beggiatoa leptomitoformis
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blep03021
]
AL038_04440 (rpoH)
Transcription machinery [BR:
blep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL038_04440 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ALG67097
UniProt:
A0A2N9YAN2
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All DBs
Position
complement(1062511..1063380)
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AA seq
289 aa
AA seq
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MSNALALNIDSQLAVLSHDVDRYARAVKTVPMLSAEEERELAERLQKEGDLEAARILILS
NLRFVLHIASGYRGYGLPQADLIQEGNVGLMKAVKRFDPTMGVRLVSFAVHWIRAEIHEY
ILRNWRIVKVATTKAQRKLFFNLRSSKKRLGWMSHAEVEKVATDLGVSIKDVLEMEKRMG
LNDISFDPPEESDEADEMLAPAAYLEDVRYDPAVLIEENEWEQHNDGQLHTAFASLDARS
KDIIWQRWMSDEKATLHDLAAKYNVSAERIRQIESEAMKKLKKNIVIDA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgcactcgctttaaatatcgatagtcaattagctgtactcagtcacgatgtc
gaccgttatgccagagcggtaaaaacggtgccgatgttaagcgcggaagaagaacgagaa
cttgccgaacgcttgcaaaaagaaggtgatttagaagcagcacggattttaattctctcc
aatctgcgattcgtcttacacatcgctagcggatatcggggctatggtttgcctcaagcc
gatttaattcaagaaggcaatgttggcttgatgaaagcagtcaaacggtttgacccgact
atgggtgtgcgtttggtttctttcgcggttcattggattcgtgcagaaattcacgaatat
attttgcgaaattggcgcatcgttaaagttgcgacaacaaaagcacaacgaaaactattc
tttaatttacgtagctcaaaaaaacgcttgggttggatgtcacatgcagaagttgaaaaa
gtggcgaccgatttaggggttagtattaaagacgtgttagagatggaaaaacggatgggg
ttaaacgatatttcttttgacccacccgaagaaagtgatgaagctgatgaaatgcttgcc
cctgcggcctatttagaagatgttcgttatgaccccgctgtattgattgaagaaaatgag
tgggaacaacataacgatggacaattgcacaccgcttttgccagtttagatgcccgcagt
aaagatattatttggcaacgctggatgagtgacgagaaagcgacattgcacgacttagcc
gcaaaatataatgtttctgcggaacgcattcgccagattgaaagtgaagcgatgaaaaaa
ctaaagaaaaatattgtaattgacgcataa
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