Beggiatoa leptomitoformis: AL038_09015
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Entry
AL038_09015 CDS
T04090
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL038_09015 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blep03019
]
AL038_09015 (pcnB)
Enzymes [BR:
blep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AL038_09015 (pcnB)
Messenger RNA biogenesis [BR:
blep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AL038_09015 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ALG67818
UniProt:
A0A2N9YHF2
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All DBs
Position
complement(2167372..2168850)
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AA seq
492 aa
AA seq
DB search
MTPYKRLVDGIKKILKSFEPSEVQPQTALSSIIDTQKPVPLRISRAEHALSRKNISKSAL
KVLYQLQSAGFQAYIVGGGVRDVLLGKQPKDFDIVTNALPEQVKNVFRNCRLIGRRFVLA
HVYFGQEIVEVATFRASHGGKVNGNERVIEDGRIVRDNVYGTTVDEDANRRDFTFNALYY
DINDFAILDYANGMADLQAGIVRLIGDPMLRYQEDPVRMLRAVRFAAKLGFTIENYTAEP
IPQLGGLLADVPSARLHDEVLKLFLSGHGLKSFRYLRQYGLFEHLFRQTHECILENPNVL
TMVEQVLKNTDERVAKQQSVNPAFLFAALLWSPILKVLPFHREEGASEQDCLINAMQRVM
NKQVKQVAIPKRISVIMQEIWLMQPRLLQRKNKRKRLLLMEHPRFRAAYDFLLLRAFLDA
EAREGAEWWTQALTTEVVARVPEENTPVIAEIEETLIISTPPTHPAIHKQPHHNRRKRRP
YRRRNDASQSES
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgactccttataaacgcttggttgatggcataaaaaaaatattaaaatcttttgaacct
tctgaggtgcaaccgcagacggcgttgtcatctattatagatacgcaaaagcctgttcct
ttacgtatttcacgtgcagaacacgccctttctcgtaaaaatattagtaaatctgcccta
aaagtgttgtatcaattacaaagtgctggttttcaggcttatattgtgggtggtggtgtt
cgtgatgttcttttaggtaaacaaccaaaagattttgatattgttactaatgccttacct
gaacaagttaaaaacgtttttcgcaattgccgtttaattggtcgtcgctttgtactcgcg
catgtgtattttggacaagaaattgttgaagtcgctacctttagagcaagccatggtggc
aaagtgaatggcaatgaacgggtgatagaagacggaagaattgtgcgtgataatgtgtat
ggtacaaccgttgatgaagacgcgaatcgtcgagattttacttttaacgctttgtattat
gacataaatgattttgccattttagactacgccaatggcatggcagatttacaagcgggt
attgtgcgtttaatcggcgacccgatgttacgttatcaagaagaccctgtgcgtatgttg
cgggcggtgcggtttgcggcaaaattgggttttacgattgaaaactatacggctgaaccc
attccacaactgggtggtttattagccgatgtaccttctgcacgtttgcatgatgaagtt
ttaaaactgtttttaagtggacatggtttaaaatctttccgctatttacgacaatacggt
ttatttgaacatttatttcgtcaaacacatgagtgcattctagaaaatcccaatgtcttg
acgatggtcgaacaagtattaaaaaatacagatgagcgagttgctaaacagcaatccgtt
aatcctgcctttttattcgccgcgttgctctggtcgcctattctcaaagtcttacctttt
caccgtgaagaaggggcgagtgaacaagattgtctgattaatgcaatgcaacgagtgatg
aataaacaagttaaacaagttgctattcctaaacgtattagtgtgattatgcaagaaatt
tggttaatgcaaccacgtttgttacaacgaaaaaataagcgtaaacgcctattattaatg
gaacatccccgttttcgggccgcttatgatttcctcttattgcgggcatttttagacgcg
gaagcgcgtgaaggggcagaatggtggacgcaggcattgaccacagaagttgtggcgcgt
gtgcctgaagagaatacacccgttattgctgaaatagaagaaacattaataatatcaaca
ccaccgacgcatcccgccattcataaacaaccgcatcataatcgcaggaaacgtcgtcct
tatcggcgtagaaacgacgcatcgcaaagcgaatcctag
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