Beggiatoa leptomitoformis: AL038_09220
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Entry
AL038_09220 CDS
T04090
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
blep
Beggiatoa leptomitoformis
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
blep03000
]
AL038_09220
Transcription factors [BR:
blep03000
]
Prokaryotic type
Helix-turn-helix
Other families
AL038_09220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
AAA_5
PAS_4
AAA_2
PAS
PAS_9
Mg_chelatase
Diguanyl_cycl_sensor
AAA_7
AAA
HTH_30
IclR_C
DUF815
HTH_AraC
AAA_3
AAA_16
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
ALG67854
LinkDB
All DBs
Position
complement(2209131..2211215)
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AA seq
694 aa
AA seq
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MNNNYNDTLFHRPNIRGCQDMIFDAVTHHHVQQIYSNIDKQGLTEKLEAQIARSWERCVQ
SYRIDPEAPRKPLIIEHAELTDHRERIDELLGDFAKEEMAQLYQRIVGSGYSVILTNSDG
IIVNYVGDPTLTEYFNRSGLLPGAIWTEEKEGTNGIGTCLYEKSPVIVCREEHFRTSHTI
LTCSAAPIFDAQGDLLAVLDVSSTSAQDSRESHRHTAALVNISARQIENFGFIRQCQHHW
ILHFHPKSYYIGHVTEGLLAIDEAGHVIAANQNAVHYFNKNRTEFIGKNISELFTTSLTL
LMTYTNRQPNGLQLVYDAQHGHPYHTQLQFPKRRSVPSTSIQRIPTTQMPLCMTLEALAG
KDPSMAFNVRYAQKVMNKNIPILLQGETGTGKEALAKAIHEASQRRHKSFVALNCAAIPE
SLIESELFGYKHGAFTGARREGMRGKILQSHGGTLFLDEIGDMPLTLQTRLLRVLEEKEV
LPLGSEVPIAIDLTVVSATHHNLPRLIAEGAFREDLYYRLNGITLTLPSLRERTDIDSLI
HCALAAENTENEAIEIEAEAFELLASYNWPGNIRQLRNVIRTALALQTGNLVTRHDLPPE
ITCRPLLSLRTSLIDVADMSNTVPHSSITTPAVSRVQPPSTTDIPDLDSAEKNVILQTLE
HHRWNITNTAVSLKMSRNTLYRKMKKHAIALSSL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaattataatgacacactttttcacagaccaaatatcaggggatgtcaggat
atgatatttgatgcagttactcaccaccatgttcaacaaatctattccaatatagataaa
caaggtcttacagaaaaactggaggcacaaattgcccgctcgtgggaaagatgcgtccaa
agttatcgtatagacccagaagcaccacggaagccactgattattgaacatgcagaacta
acagaccatcgtgaacgcattgatgaattgttaggtgacttcgccaaagaagaaatggct
cagttatatcaacgcattgttggttcaggatattcagttatcctaacgaatagcgatggt
attattgtcaattatgttggcgacccaacgctcacagaatattttaatcgctcaggctta
ttaccgggggctatttggacggaagaaaaagaaggaaccaatgggattggtacatgtctt
tatgaaaaatctcccgttattgtttgtcgtgaggaacatttccgcacctctcacactatt
ctaacgtgttctgctgcccctatttttgatgcgcaaggtgatttactcgccgtgttggat
gtctcctcaaccagtgcgcaagactctcgagaaagccaccgtcatacagcggctttggtt
aatatttccgctcgtcaaattgagaactttggcttcattcgtcaatgtcaacaccattgg
attttacatttccatccaaagtcttactatatcggacatgtaacagaaggcctacttgct
attgatgaagctggacatgttatcgcagctaatcaaaacgctgtgcattattttaataaa
aatagaactgaatttattggtaaaaacattagtgagttatttacaacaagtttaacatta
ctaatgacttatacaaatcgtcaaccaaatgggctacaactggtttacgatgctcaacac
ggacatccttatcatacccagctacaatttcctaaacgtcgtagtgttcctagcacgagc
attcaacggattccgacaacacaaatgcccttatgcatgacattagaagctttagcgggt
aaagacccaagtatggcttttaacgtacggtatgcacaaaaggtaatgaataaaaatatt
cctatcctcttacaaggggaaacaggaacaggcaaagaagcccttgcaaaagccattcac
gaagctagccaacgcagacataaatcttttgttgccttaaactgtgcggcaattccagaa
tcattaatcgaaagcgaattgtttggttataaacatggcgcgtttacaggcgcgcgacgt
gaagggatgcgtggcaaaattctacaatcacatggtggaacactgtttttagatgaaatt
ggcgatatgcctttaacacttcaaactcgactgttacgggtattagaagaaaaagaagta
ttaccactaggaagtgaagtacctattgcgattgatcttactgttgtcagtgcaacacat
cacaatttgccaagactgattgcagaaggtgcttttcgtgaagatttatattatcggctc
aatggcattacgctaaccttaccctcactacgcgaacgtactgatattgattcgctaatc
cattgcgcgctagcggctgaaaatacagaaaatgaggccatagagatagaagctgaagct
tttgagttattagcaagttataactggccgggtaatatccgccaattgcgtaatgttatt
cgcacggcgttagcactacaaacaggaaatctggtcacacgtcatgatttaccaccagaa
attacctgtagaccgcttctctctttgcgtacatcgcttattgatgttgcggacatgtcc
aacacagtaccgcactccagtattacaacacctgccgtttcacgtgttcaaccgccatca
acaacagatattcctgatttagattcagcagaaaaaaatgttatcttacaaacattagag
catcatcgctggaatatcacgaatactgcggtgagcttaaaaatgagtcgtaacacgctt
tatcgaaaaatgaagaagcacgctatcgcgttgtcaagtttataa
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